Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19220

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,776,257	+		CA265_RS19215	0.15	-1.7
4,776,317	+		CA265_RS19215	0.22	-1.8
4,776,317	+		CA265_RS19215	0.22	-2.5
4,776,317	+		CA265_RS19215	0.22	-2.3
4,776,341	+		CA265_RS19215	0.24	+0.3
4,776,407	+		CA265_RS19215	0.31	-0.3
4,776,407	+		CA265_RS19215	0.31	-1.5
4,776,408	-		CA265_RS19215	0.32	+0.2
4,776,409	+		CA265_RS19215	0.32	-1.9
4,776,409	+		CA265_RS19215	0.32	-1.8
4,776,409	+		CA265_RS19215	0.32	-1.5
4,776,409	+		CA265_RS19215	0.32	-0.1
4,776,411	+		CA265_RS19215	0.32	-1.2
4,776,464	+		CA265_RS19215	0.38	-1.6
4,776,554	+		CA265_RS19215	0.48	-2.4
4,776,577	-		CA265_RS19215	0.50	-0.6
4,776,577	-		CA265_RS19215	0.50	-2.0
4,776,582	-		CA265_RS19215	0.51	-0.9
4,776,582	-		CA265_RS19215	0.51	-2.1
4,776,602	-		CA265_RS19215	0.53	-2.6
4,776,633	+		CA265_RS19215	0.56	-1.4
4,776,714	+		CA265_RS19215	0.65	+0.2
4,776,715	-		CA265_RS19215	0.65	-2.5
4,776,717	+		CA265_RS19215	0.65	-1.5
4,776,928	-		CA265_RS19215	0.89	-0.0
4,776,928	-		CA265_RS19215	0.89	-1.1
4,776,974	-				-1.7
4,776,974	-				-0.8
4,776,978	-				-2.8
4,777,021	-				-2.1
4,777,157	+				-1.3
4,777,214	-		CA265_RS19220	0.16	-1.6
4,777,332	+		CA265_RS19220	0.32	-1.8
4,777,387	+		CA265_RS19220	0.39	-2.1
4,777,415	+		CA265_RS19220	0.43	-1.8
4,777,453	+		CA265_RS19220	0.48	-0.3
4,777,597	+		CA265_RS19220	0.67	-1.7
4,777,609	-		CA265_RS19220	0.69	+1.0
4,777,710	+		CA265_RS19220	0.82	-0.0
4,777,711	-		CA265_RS19220	0.82	-2.5
4,777,739	+		CA265_RS19220	0.86	-0.8
4,777,740	-		CA265_RS19220	0.86	-1.1
4,777,846	-				-1.4
4,777,859	+				+0.1
4,777,874	+				-0.2
4,777,914	+				-0.8
4,777,948	-				-1.0
4,777,951	+				-2.3
4,777,996	-		CA265_RS19225	0.14	-1.6
4,778,005	-		CA265_RS19225	0.15	-0.0
4,778,069	+		CA265_RS19225	0.21	-2.5
4,778,180	+		CA265_RS19225	0.32	-1.6
4,778,180	+		CA265_RS19225	0.32	-2.6
4,778,181	-		CA265_RS19225	0.32	-2.3
4,778,183	+		CA265_RS19225	0.32	-1.1
4,778,184	-		CA265_RS19225	0.32	-0.8
4,778,184	-		CA265_RS19225	0.32	-1.7
4,778,228	+		CA265_RS19225	0.37	-0.0
4,778,239	+		CA265_RS19225	0.38	-1.8
4,778,256	-		CA265_RS19225	0.40	-1.8
4,778,312	-		CA265_RS19225	0.45	-2.2
4,778,374	+		CA265_RS19225	0.51	-1.1
4,778,377	+		CA265_RS19225	0.52	-2.5
4,778,397	+		CA265_RS19225	0.54	-1.7
4,778,444	+		CA265_RS19225	0.58	-2.5
4,778,452	-		CA265_RS19225	0.59	-1.5
4,778,510	+		CA265_RS19225	0.65	-3.3
4,778,539	-		CA265_RS19225	0.68	-2.8
4,778,561	-		CA265_RS19225	0.70	-0.3
4,778,601	-		CA265_RS19225	0.74	-1.2
4,778,707	-		CA265_RS19225	0.84	-2.0
4,778,731	-		CA265_RS19225	0.87	-0.8
4,778,734	+		CA265_RS19225	0.87	-1.2
4,778,821	-				-1.9