Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18995

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,725,382	-		CA265_RS18990	0.86	+0.4
4,725,454	+		CA265_RS18990	0.87	-0.1
4,725,472	+		CA265_RS18990	0.88	+0.7
4,725,473	-		CA265_RS18990	0.88	+0.5
4,725,498	-		CA265_RS18990	0.88	-0.1
4,725,519	-		CA265_RS18990	0.88	+0.1
4,725,519	-		CA265_RS18990	0.88	+0.3
4,725,524	+		CA265_RS18990	0.88	-0.8
4,725,573	+		CA265_RS18990	0.89	-0.1
4,725,574	-		CA265_RS18990	0.89	+0.2
4,725,631	-		CA265_RS18990	0.90	+0.8
4,725,638	+		CA265_RS18990	0.90	-0.3
4,725,642	+		CA265_RS18990	0.90	-0.9
4,725,678	+				+0.2
4,725,683	+				+0.5
4,725,684	-				-0.0
4,725,704	-				-0.3
4,725,752	-				+0.3
4,725,805	-				+0.7
4,725,918	+				+1.1
4,725,986	+				-0.2
4,725,993	-				+1.1
4,726,001	-				-0.5
4,726,008	+				-1.0
4,726,087	-				+0.1
4,726,090	+				-0.1
4,726,091	-				-0.1
4,726,097	+				-0.5
4,726,146	-				+0.2
4,726,177	-				-0.5
4,726,266	-				+0.0
4,726,271	+				+0.1
4,726,354	-				+0.3
4,726,380	-				+0.5
4,726,399	+				+0.8
4,726,523	-		CA265_RS18995	0.25	+0.6
4,726,678	+		CA265_RS18995	0.52	-0.9
4,726,706	-		CA265_RS18995	0.56	+0.2
4,726,711	+		CA265_RS18995	0.57	-1.7
4,726,746	-		CA265_RS18995	0.63	-1.2
4,726,789	+		CA265_RS18995	0.71	-0.4
4,726,789	+		CA265_RS18995	0.71	-0.1
4,726,823	+		CA265_RS18995	0.76	-0.8
4,726,857	+		CA265_RS18995	0.82	+1.7
4,726,858	-		CA265_RS18995	0.82	-0.4
4,726,861	+		CA265_RS18995	0.83	-0.4
4,726,885	-		CA265_RS18995	0.87	-0.3
4,726,991	+				-0.8
4,726,992	-				+0.4
4,726,993	+				-0.9
4,726,994	-				+0.2
4,727,039	+				-0.8
4,727,059	+				-1.3
4,727,059	+				-0.5
4,727,060	-				-3.0
4,727,076	-				-0.7
4,727,087	+				-0.7
4,727,087	+				-0.7
4,727,099	-				-1.5
4,727,154	-				-0.5
4,727,172	+				-0.8
4,727,173	-				-0.6
4,727,216	-		CA265_RS19000	0.11	-1.0
4,727,239	+		CA265_RS19000	0.12	-0.7
4,727,240	-		CA265_RS19000	0.12	-0.8
4,727,303	+		CA265_RS19000	0.15	-0.7
4,727,357	-		CA265_RS19000	0.17	-4.6
4,727,394	+		CA265_RS19000	0.18	-0.3
4,727,399	+		CA265_RS19000	0.19	-0.5
4,727,443	+		CA265_RS19000	0.21	+0.4
4,727,454	-		CA265_RS19000	0.21	-0.0
4,727,461	+		CA265_RS19000	0.21	-0.4
4,727,461	+		CA265_RS19000	0.21	-2.4
4,727,461	+		CA265_RS19000	0.21	-0.0
4,727,462	-		CA265_RS19000	0.21	-0.0
4,727,465	+		CA265_RS19000	0.22	-2.4
4,727,544	+		CA265_RS19000	0.25	-0.4
4,727,549	-		CA265_RS19000	0.25	+0.4
4,727,591	+		CA265_RS19000	0.27	-1.8
4,727,592	-		CA265_RS19000	0.27	-0.6
4,727,682	+		CA265_RS19000	0.31	-0.7
4,727,682	+		CA265_RS19000	0.31	-2.3
4,727,683	-		CA265_RS19000	0.31	+0.8
4,727,683	-		CA265_RS19000	0.31	-2.1
4,727,686	+		CA265_RS19000	0.31	+0.3
4,727,687	-		CA265_RS19000	0.31	+0.2
4,727,717	+		CA265_RS19000	0.32	-1.0
4,727,763	+		CA265_RS19000	0.34	-0.9
4,727,763	+		CA265_RS19000	0.34	+0.5
4,727,816	+		CA265_RS19000	0.37	-0.4
4,727,830	-		CA265_RS19000	0.37	-0.2
4,727,860	+		CA265_RS19000	0.39	-1.7
4,727,860	+		CA265_RS19000	0.39	+0.9
4,727,861	-		CA265_RS19000	0.39	-0.8
4,727,867	+		CA265_RS19000	0.39	-1.4
4,727,929	-		CA265_RS19000	0.42	-1.3
4,727,929	-		CA265_RS19000	0.42	-0.1
4,727,929	-		CA265_RS19000	0.42	-0.1
4,727,932	+		CA265_RS19000	0.42	-1.5
4,727,933	-		CA265_RS19000	0.42	-0.4