Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18835

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,683,534	+		CA265_RS18830	0.71	+0.8
4,683,641	-		CA265_RS18830	0.75	+1.2
4,683,723	-		CA265_RS18830	0.77	-1.2
4,683,727	+		CA265_RS18830	0.77	+0.4
4,683,729	+		CA265_RS18830	0.77	+0.8
4,683,735	+		CA265_RS18830	0.78	-0.3
4,683,758	-		CA265_RS18830	0.78	-0.7
4,683,785	-		CA265_RS18830	0.79	-0.4
4,683,885	-		CA265_RS18830	0.82	+0.4
4,683,905	+				-0.6
4,683,974	+		CA265_RS18830	0.85	+1.3
4,683,988	-		CA265_RS18830	0.85	-0.4
4,684,106	-		CA265_RS18830	0.89	-1.2
4,684,107	+		CA265_RS18830	0.89	-0.5
4,684,134	+		CA265_RS18830	0.90	-0.4
4,684,324	-				-0.6
4,684,383	-				-2.0
4,684,435	-				-1.9
4,684,454	+				-2.1
4,684,454	+				-0.1
4,684,455	-				-0.7
4,684,459	+				+1.0
4,684,537	+				-1.1
4,684,569	-				-0.4
4,684,592	-				-0.0
4,684,592	-				+0.6
4,684,664	-				-1.2
4,684,664	-				+0.1
4,684,884	+		CA265_RS18835	0.15	-0.8
4,684,884	+		CA265_RS18835	0.15	-1.2
4,684,885	-		CA265_RS18835	0.15	-0.1
4,684,899	-		CA265_RS18835	0.15	-2.6
4,684,928	+		CA265_RS18835	0.16	-1.4
4,684,929	-		CA265_RS18835	0.16	-0.4
4,685,037	+		CA265_RS18835	0.20	-1.6
4,685,078	-		CA265_RS18835	0.21	-0.4
4,685,223	-		CA265_RS18835	0.27	-0.9
4,685,225	+		CA265_RS18835	0.27	-0.2
4,685,225	+		CA265_RS18835	0.27	+0.9
4,685,413	+		CA265_RS18835	0.33	-0.1
4,685,413	+		CA265_RS18835	0.33	-1.5
4,685,482	-		CA265_RS18835	0.36	+0.4
4,685,534	-		CA265_RS18835	0.37	+0.2
4,685,737	+		CA265_RS18835	0.45	-0.9
4,685,737	+		CA265_RS18835	0.45	-0.4
4,686,213	-		CA265_RS18835	0.61	-0.2
4,686,213	-		CA265_RS18835	0.61	+1.1
4,686,222	-		CA265_RS18835	0.61	-1.0
4,686,309	+		CA265_RS18835	0.65	-0.4
4,686,488	+		CA265_RS18835	0.71	-1.4
4,686,489	-		CA265_RS18835	0.71	-1.6
4,686,489	-		CA265_RS18835	0.71	-0.4
4,686,553	-		CA265_RS18835	0.73	-0.4
4,686,709	-		CA265_RS18835	0.79	-0.6
4,686,740	+		CA265_RS18835	0.80	+2.0
4,686,742	+		CA265_RS18835	0.80	-0.0
4,686,743	-		CA265_RS18835	0.80	-0.4
4,686,827	-		CA265_RS18835	0.83	-0.5
4,686,952	-		CA265_RS18835	0.87	+2.5
4,686,959	+		CA265_RS18835	0.87	-0.2
4,687,058	+				+0.4
4,687,065	-				-0.4
4,687,065	-				-0.8
4,687,112	+				-1.0
4,687,135	-				+2.0
4,687,431	+				+0.1
4,687,435	+				-1.7
4,687,456	+				-0.0
4,687,456	+				+0.7
4,687,457	-				+0.8
4,687,515	-		CA265_RS18840	0.13	+1.6
4,687,674	+		CA265_RS18840	0.49	+0.4
4,687,675	-		CA265_RS18840	0.49	-0.5
4,687,708	+		CA265_RS18840	0.57	+0.8
4,687,723	-		CA265_RS18840	0.60	-1.7
4,687,730	-		CA265_RS18840	0.62	-0.0
4,687,793	+		CA265_RS18840	0.76	-0.7
4,687,793	+		CA265_RS18840	0.76	+0.1
4,687,796	-		CA265_RS18840	0.77	-0.5
4,687,873	+				-2.4
4,687,873	+				-1.0
4,687,874	-				-0.2
4,688,001	+		CA265_RS18845	0.18	+0.7
4,688,049	+		CA265_RS18845	0.27	+0.2
4,688,093	-		CA265_RS18845	0.35	-0.4
4,688,153	+		CA265_RS18845	0.45	+0.2
4,688,163	-		CA265_RS18845	0.47	-0.7
4,688,163	-		CA265_RS18845	0.47	-0.8
4,688,210	-		CA265_RS18845	0.56	-1.0
4,688,227	+		CA265_RS18845	0.59	+0.1
4,688,316	+		CA265_RS18845	0.75	+0.4
4,688,316	+		CA265_RS18845	0.75	-0.7
4,688,316	+		CA265_RS18845	0.75	+0.7
4,688,317	-		CA265_RS18845	0.75	-0.4
4,688,319	+		CA265_RS18845	0.75	-0.8