Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18745
Experiment: R2A with A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with A22 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,667,480 | - | -0.3 | |||
4,667,585 | + | +0.6 | |||
4,667,786 | + | CA265_RS18745 | 0.46 | -1.1 | |
4,667,790 | + | CA265_RS18745 | 0.47 | -1.6 | |
4,667,934 | + | CA265_RS18745 | 0.82 | -1.6 | |
4,668,055 | - | -0.5 | |||
4,668,651 | - | CA265_RS18755 | 0.18 | +0.4 | |
4,668,651 | - | CA265_RS18755 | 0.18 | +0.9 | |
4,668,734 | + | CA265_RS18755 | 0.24 | -0.1 | |
4,668,880 | + | CA265_RS18755 | 0.36 | -2.1 | |
4,668,954 | + | CA265_RS18755 | 0.42 | -0.6 |
Or see this region's nucleotide sequence