Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18030

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,503,510	+		CA265_RS18020	0.86	-1.4
4,503,666	-				+0.3
4,503,674	+				+0.7
4,503,682	+				-1.1
4,503,682	+				-1.2
4,503,682	+				-0.9
4,503,940	+				+2.6
4,504,339	-				-0.5
4,504,400	+				+0.6
4,504,476	+				-0.2
4,504,481	+				-0.3
4,504,514	+				+0.7
4,504,523	+		CA265_RS18030	0.11	+0.0
4,504,528	+		CA265_RS18030	0.12	-0.2
4,504,532	+		CA265_RS18030	0.12	+0.5
4,504,534	+		CA265_RS18030	0.12	-0.7
4,504,541	+		CA265_RS18030	0.13	-0.8
4,504,617	+		CA265_RS18030	0.22	+0.6
4,504,737	+		CA265_RS18030	0.36	-0.1
4,504,748	-		CA265_RS18030	0.37	+0.6
4,504,835	+		CA265_RS18030	0.47	+0.5
4,504,840	+		CA265_RS18030	0.47	-0.8
4,504,840	+		CA265_RS18030	0.47	-0.2
4,504,851	+		CA265_RS18030	0.49	-1.3
4,504,852	-		CA265_RS18030	0.49	-0.8
4,504,939	+		CA265_RS18030	0.59	+0.1
4,505,177	-		CA265_RS18030	0.86	+0.4
4,505,230	-				-0.6
4,505,249	-				-1.3
4,505,279	-				-1.5
4,505,288	-				+0.9
4,505,322	-				-0.6
4,505,398	+				-0.8
4,505,399	-				-0.2
4,505,411	-				-1.0
4,505,417	-				-0.2
4,505,470	-				-0.8
4,505,470	-				-0.6
4,505,470	-				+0.1
4,505,470	-				-0.1
4,505,506	+				-0.4
4,505,579	+				-0.2
4,505,580	-				-1.1
4,505,580	-				-2.1
4,505,653	+				-0.3
4,505,782	+				-0.7
4,505,792	-				+0.7
4,505,828	+		CA265_RS18035	0.17	+1.0
4,505,828	+		CA265_RS18035	0.17	-0.1
4,505,828	+		CA265_RS18035	0.17	-0.5
4,505,863	-		CA265_RS18035	0.33	-0.4
4,505,863	-		CA265_RS18035	0.33	+1.3
4,505,900	-		CA265_RS18035	0.50	+0.2
4,505,904	-		CA265_RS18035	0.52	-0.1
4,505,991	+				-0.1
4,505,992	-				-0.0
4,505,992	-				+0.7
4,506,021	+				-1.1
4,506,044	+				-0.6
4,506,044	+				+0.2
4,506,045	-				-0.5
4,506,175	-		CA265_RS18040	0.14	-1.1
4,506,181	+		CA265_RS18040	0.15	+0.7
4,506,182	-		CA265_RS18040	0.15	+0.0
4,506,294	-		CA265_RS18040	0.30	-0.2
4,506,294	-		CA265_RS18040	0.30	-0.2
4,506,294	-		CA265_RS18040	0.30	+1.0