Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17665

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,406,367	+				-0.1
4,406,389	+				-0.3
4,406,454	-				+0.4
4,406,459	+				+1.2
4,406,536	+		CA265_RS17660	0.13	+0.2
4,406,537	-		CA265_RS17660	0.13	-1.6
4,406,542	-		CA265_RS17660	0.14	-0.7
4,406,648	+		CA265_RS17660	0.27	-0.1
4,406,710	+		CA265_RS17660	0.34	-0.3
4,406,722	+		CA265_RS17660	0.36	+2.2
4,406,726	+		CA265_RS17660	0.36	-0.4
4,406,745	+		CA265_RS17660	0.39	-0.2
4,406,842	+		CA265_RS17660	0.50	+2.1
4,406,851	+		CA265_RS17660	0.52	-0.3
4,406,851	+		CA265_RS17660	0.52	-0.1
4,406,851	+		CA265_RS17660	0.52	+0.2
4,406,852	-		CA265_RS17660	0.52	-1.1
4,406,852	-		CA265_RS17660	0.52	-0.2
4,406,858	+		CA265_RS17660	0.52	+0.1
4,406,932	+		CA265_RS17660	0.61	-0.1
4,406,963	-		CA265_RS17660	0.65	+0.4
4,406,963	-		CA265_RS17660	0.65	-0.2
4,406,993	+		CA265_RS17660	0.69	-0.9
4,407,046	+		CA265_RS17660	0.75	+0.1
4,407,071	+		CA265_RS17660	0.78	+1.1
4,407,118	-		CA265_RS17660	0.84	-0.3
4,407,219	-				-2.1
4,407,273	+				-0.3
4,407,281	+				-1.2
4,407,363	+				-0.9
4,407,381	-				-1.5
4,407,419	+		CA265_RS17665	0.17	-1.8
4,407,419	+		CA265_RS17665	0.17	-1.6
4,407,419	+		CA265_RS17665	0.17	-1.7
4,407,423	-		CA265_RS17665	0.18	-0.2
4,407,586	-		CA265_RS17665	0.58	-2.7
4,407,641	+		CA265_RS17665	0.71	-0.9
4,407,642	-		CA265_RS17665	0.72	-0.8
4,407,689	+		CA265_RS17665	0.83	-1.8
4,407,697	-		CA265_RS17665	0.85	-3.3
4,407,732	+				-0.5
4,407,754	+				-0.7
4,407,795	-				+0.2
4,407,795	-				-0.4
4,407,858	+				+1.1
4,407,858	+				-1.5
4,407,904	-				-0.5
4,408,034	+		CA265_RS17670	0.24	-0.1
4,408,035	-		CA265_RS17670	0.25	-0.7
4,408,066	+		CA265_RS17670	0.29	-0.4
4,408,136	+		CA265_RS17670	0.38	+0.5
4,408,137	-		CA265_RS17670	0.38	-0.3
4,408,251	+		CA265_RS17670	0.54	-0.2
4,408,252	-		CA265_RS17670	0.54	+0.7
4,408,264	-		CA265_RS17670	0.56	-0.2
4,408,321	+		CA265_RS17670	0.63	-0.7
4,408,349	+		CA265_RS17670	0.67	-0.3
4,408,385	+		CA265_RS17670	0.72	-0.7
4,408,386	-		CA265_RS17670	0.72	+0.4
4,408,460	-		CA265_RS17670	0.82	+0.1
4,408,460	-		CA265_RS17670	0.82	+0.5
4,408,460	-		CA265_RS17670	0.82	-0.6
4,408,460	-		CA265_RS17670	0.82	-0.2
4,408,505	+		CA265_RS17670	0.88	-1.4
4,408,529	-				+0.3
4,408,532	-				+0.0
4,408,555	+				-0.2
4,408,603	+				+0.9
4,408,636	-				-0.5
4,408,645	+				-1.3
4,408,648	+				+1.2
4,408,648	+				+1.0
4,408,649	-				-1.5