Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17330

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,328,904	-				-0.4
4,328,909	+				-0.2
4,328,909	+				-0.7
4,328,909	+				-1.8
4,328,910	-				-0.2
4,328,910	-				-1.4
4,328,910	-				+0.4
4,328,980	+				-0.7
4,329,049	-				+1.6
4,329,053	-				-0.2
4,329,081	-				-0.4
4,329,099	+		CA265_RS17325	0.12	-1.1
4,329,169	+		CA265_RS17325	0.25	-0.5
4,329,171	+		CA265_RS17325	0.25	-0.2
4,329,171	+		CA265_RS17325	0.25	+0.8
4,329,172	-		CA265_RS17325	0.25	-1.4
4,329,172	-		CA265_RS17325	0.25	-1.3
4,329,175	-		CA265_RS17325	0.26	-0.9
4,329,175	-		CA265_RS17325	0.26	-0.4
4,329,177	+		CA265_RS17325	0.26	+0.3
4,329,178	-		CA265_RS17325	0.26	-1.1
4,329,178	-		CA265_RS17325	0.26	-1.4
4,329,181	-		CA265_RS17325	0.27	+0.6
4,329,290	+		CA265_RS17325	0.45	-0.3
4,329,293	+		CA265_RS17325	0.46	+1.0
4,329,293	+		CA265_RS17325	0.46	+0.6
4,329,351	+		CA265_RS17325	0.56	-0.3
4,329,352	-		CA265_RS17325	0.56	-1.4
4,329,356	-		CA265_RS17325	0.57	-1.4
4,329,369	-		CA265_RS17325	0.59	-1.0
4,329,392	+		CA265_RS17325	0.63	+0.0
4,329,491	+		CA265_RS17325	0.80	+0.1
4,329,579	-				-0.3
4,329,579	-				-0.0
4,329,638	+				-0.7
4,329,639	-				+0.4
4,329,645	+				-0.8
4,329,645	+				-0.7
4,329,679	+				-0.3
4,329,705	+				-1.1
4,329,714	+				-2.6
4,329,787	-				-0.6
4,329,804	-				-0.7
4,329,981	-		CA265_RS17330	0.50	-0.1
4,329,993	-		CA265_RS17330	0.53	-2.1
4,330,065	-		CA265_RS17330	0.76	-0.4
4,330,074	+		CA265_RS17330	0.79	+0.7
4,330,075	-		CA265_RS17330	0.79	-1.1
4,330,140	+				+0.7
4,330,151	-				-0.1
4,330,170	+				-1.1
4,330,170	+				+0.2
4,330,170	+				+0.1
4,330,171	-				-1.0
4,330,171	-				-0.0
4,330,172	+				-0.1
4,330,173	-				-1.3
4,330,206	-				+0.1
4,330,224	+				-0.9
4,330,229	-				+1.7
4,330,267	-				-0.0
4,330,302	-		CA265_RS17335	0.14	+0.3
4,330,328	-		CA265_RS17335	0.19	-0.2
4,330,338	-		CA265_RS17335	0.21	+0.1
4,330,343	+		CA265_RS17335	0.22	-0.5
4,330,344	-		CA265_RS17335	0.22	-0.1
4,330,363	-		CA265_RS17335	0.26	-0.6
4,330,371	+		CA265_RS17335	0.27	-0.2
4,330,371	+		CA265_RS17335	0.27	-1.9
4,330,418	-		CA265_RS17335	0.36	+0.4
4,330,419	+		CA265_RS17335	0.37	-0.4
4,330,419	+		CA265_RS17335	0.37	-0.4
4,330,420	-		CA265_RS17335	0.37	+0.5
4,330,541	+		CA265_RS17335	0.60	+0.4
4,330,542	-		CA265_RS17335	0.60	-0.6
4,330,565	+		CA265_RS17335	0.65	+1.1
4,330,566	-		CA265_RS17335	0.65	+0.3
4,330,652	+		CA265_RS17335	0.82	-0.5
4,330,705	+				-1.1
4,330,706	-				+0.0
4,330,798	+		CA265_RS17340	0.12	-0.2
4,330,799	-		CA265_RS17340	0.13	+0.1
4,330,799	-		CA265_RS17340	0.13	-0.6
4,330,826	+		CA265_RS17340	0.17	-0.4
4,330,829	-		CA265_RS17340	0.18	-1.1
4,330,923	+		CA265_RS17340	0.35	-0.5
4,330,931	-		CA265_RS17340	0.36	-0.1
4,331,038	-		CA265_RS17340	0.56	+0.9