Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17290

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,322,994	-				-0.2
4,323,024	+				+0.5
4,323,107	+				-0.6
4,323,108	-				+0.9
4,323,108	-				-0.1
4,323,109	+				-0.9
4,323,109	+				-1.0
4,323,110	-				-0.2
4,323,159	+				-0.4
4,323,159	+				-0.4
4,323,159	+				-0.6
4,323,159	+				+1.5
4,323,239	+				-0.0
4,323,240	-				-0.9
4,323,243	-				-1.2
4,323,249	+				+0.8
4,323,270	+				-0.1
4,323,270	+				-0.9
4,323,364	+				-0.0
4,323,439	+				-0.4
4,323,663	+		CA265_RS17285	0.46	-0.1
4,323,664	-		CA265_RS17285	0.47	+0.2
4,323,670	+		CA265_RS17285	0.50	-0.3
4,323,721	-		CA265_RS17285	0.77	+0.7
4,323,829	-				-1.0
4,323,829	-				-0.0
4,323,868	-				+0.0
4,323,913	+		CA265_RS17290	0.51	-0.8
4,323,942	-				-0.7
4,323,965	-				-1.7
4,323,986	-				-0.7
4,324,006	+				-0.5
4,324,024	-				+0.1
4,324,025	+				+0.1
4,324,084	+				-0.1
4,324,089	+				+0.5
4,324,100	+				+0.2
4,324,134	+		CA265_RS17295	0.20	+0.2
4,324,146	-		CA265_RS17295	0.24	-0.9
4,324,146	-		CA265_RS17295	0.24	-1.1
4,324,169	+		CA265_RS17295	0.32	-0.4
4,324,192	+				+0.7
4,324,194	+		CA265_RS17295	0.40	+0.7
4,324,194	+		CA265_RS17295	0.40	+0.0
4,324,195	-		CA265_RS17295	0.40	-0.4
4,324,195	-		CA265_RS17295	0.40	-0.9
4,324,230	+		CA265_RS17295	0.52	-0.6
4,324,238	+		CA265_RS17295	0.55	-0.5
4,324,256	+		CA265_RS17295	0.61	+0.0
4,324,328	-		CA265_RS17295	0.85	+0.8
4,324,382	+				+0.4
4,324,416	-				-0.6
4,324,419	-				+0.5
4,324,475	+				-0.0
4,324,557	-		CA265_RS17300	0.31	+0.6
4,324,557	-		CA265_RS17300	0.31	+0.2
4,324,561	-		CA265_RS17300	0.33	-1.4
4,324,562	+		CA265_RS17300	0.33	-0.4
4,324,566	-		CA265_RS17300	0.35	+0.1
4,324,566	-		CA265_RS17300	0.35	-1.1
4,324,593	+		CA265_RS17300	0.45	-0.1
4,324,593	+		CA265_RS17300	0.45	+0.4
4,324,593	+		CA265_RS17300	0.45	-1.5
4,324,611	+		CA265_RS17300	0.52	-0.1
4,324,661	+		CA265_RS17300	0.72	+0.0
4,324,661	+		CA265_RS17300	0.72	+0.7
4,324,661	+		CA265_RS17300	0.72	-0.5
4,324,668	-		CA265_RS17300	0.74	-1.2
4,324,668	-		CA265_RS17300	0.74	-0.1
4,324,668	-		CA265_RS17300	0.74	-0.5
4,324,690	+		CA265_RS17300	0.83	+0.6
4,324,741	-				-1.2
4,324,745	-				+0.5
4,324,746	+				+0.7
4,324,753	-				-0.2
4,324,757	-				-0.3
4,324,839	-				+0.0
4,324,844	-				-0.1
4,324,844	-				+0.1
4,324,876	+				-0.6
4,324,877	-				-0.3
4,324,877	-				+0.3
4,324,914	+				+1.0
4,324,918	+				+0.1
4,324,918	+				-0.2
4,324,919	-				-1.3
4,324,919	-				+0.9