Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15615

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
3,930,097	+				+0.1
3,930,100	+				-0.1
3,930,100	+				+0.5
3,930,166	-				-0.4
3,930,171	+				-0.4
3,930,171	+				-0.2
3,930,172	-				-0.4
3,930,175	+				+0.4
3,930,175	+				-0.6
3,930,176	-				+0.0
3,930,202	+				-0.7
3,930,207	-				-0.5
3,930,417	-		CA265_RS15615	0.19	-0.8
3,930,455	-		CA265_RS15615	0.23	-0.4
3,930,455	-		CA265_RS15615	0.23	-1.0
3,930,484	+		CA265_RS15615	0.25	-3.1
3,930,592	+		CA265_RS15615	0.35	-1.4
3,930,624	-		CA265_RS15615	0.38	-0.1
3,930,660	+		CA265_RS15615	0.41	-2.4
3,930,731	-		CA265_RS15615	0.48	-1.2
3,930,736	+		CA265_RS15615	0.48	+0.4
3,930,915	-		CA265_RS15615	0.65	-0.7
3,930,944	+		CA265_RS15615	0.68	-3.0
3,930,945	-		CA265_RS15615	0.68	-1.7
3,930,975	+		CA265_RS15615	0.70	-0.9
3,930,976	-		CA265_RS15615	0.71	-1.0
3,931,131	-		CA265_RS15615	0.85	-1.2
3,931,131	-		CA265_RS15615	0.85	-1.0
3,931,165	+		CA265_RS15615	0.88	-1.6
3,931,293	+				-0.2
3,931,314	+				+1.0
3,931,315	-				-0.7
3,931,334	-				-0.1
3,931,334	-				-0.2
3,931,334	-				+0.6
3,931,347	+				-0.1
3,931,561	+				+0.9
3,931,580	+				+0.1
3,931,584	+				+1.5
3,931,585	-				-1.3
3,931,654	+				+0.2
3,931,670	+				-0.4
3,931,719	-				+0.0
3,931,849	+		CA265_RS15620	0.11	+1.1
3,931,915	-		CA265_RS15620	0.14	-0.7
3,931,915	-		CA265_RS15620	0.14	-0.1
3,931,927	-		CA265_RS15620	0.14	-1.0
3,931,963	+		CA265_RS15620	0.15	+2.0
3,931,965	+		CA265_RS15620	0.15	-0.8
3,932,072	+		CA265_RS15620	0.19	+0.3
3,932,076	-		CA265_RS15620	0.20	-0.1
3,932,159	-		CA265_RS15620	0.23	+0.6
3,932,189	+		CA265_RS15620	0.24	-0.1
3,932,226	-		CA265_RS15620	0.25	-0.7
3,932,252	+		CA265_RS15620	0.26	+1.1
3,932,285	+		CA265_RS15620	0.27	-0.1