Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15250

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
3,833,534	-				+0.6
3,833,536	-				-1.6
3,833,536	-				-0.3
3,833,615	-				+0.2
3,833,625	-				-0.1
3,833,726	+		CA265_RS15245	0.12	-1.1
3,833,887	-		CA265_RS15245	0.33	+0.9
3,833,955	+		CA265_RS15245	0.42	-1.6
3,833,955	+		CA265_RS15245	0.42	+1.1
3,834,200	-		CA265_RS15245	0.74	-0.0
3,834,200	-		CA265_RS15245	0.74	+0.1
3,834,209	+		CA265_RS15245	0.75	-0.6
3,834,210	-		CA265_RS15245	0.75	-2.2
3,834,210	-		CA265_RS15245	0.75	-0.7
3,834,277	-		CA265_RS15245	0.84	-1.3
3,834,298	-		CA265_RS15245	0.87	-1.3
3,834,376	+				+0.1
3,834,435	-				-0.3
3,834,492	+				-2.2
3,834,494	+				+0.1
3,834,872	+		CA265_RS15250	0.34	-0.0
3,834,874	+		CA265_RS15250	0.34	-1.3
3,834,874	+		CA265_RS15250	0.34	-1.1
3,834,874	+		CA265_RS15250	0.34	-0.6
3,834,874	+		CA265_RS15250	0.34	-1.2
3,834,954	+		CA265_RS15250	0.42	-0.3
3,834,959	+		CA265_RS15250	0.42	-0.5
3,834,968	+		CA265_RS15250	0.43	+0.2
3,834,985	-		CA265_RS15250	0.44	-0.2
3,835,032	-		CA265_RS15250	0.49	-0.7
3,835,083	-		CA265_RS15250	0.53	-0.4
3,835,107	+		CA265_RS15250	0.55	-0.8
3,835,200	+		CA265_RS15250	0.64	-0.5
3,835,201	-		CA265_RS15250	0.64	-1.0
3,835,209	-		CA265_RS15250	0.65	-0.5
3,835,241	+		CA265_RS15250	0.67	-1.2
3,835,241	+		CA265_RS15250	0.67	-1.1
3,835,241	+		CA265_RS15250	0.67	-0.6
3,835,266	+		CA265_RS15250	0.70	-1.1
3,835,272	+		CA265_RS15250	0.70	-1.1
3,835,274	+		CA265_RS15250	0.70	-0.2
3,835,371	+		CA265_RS15250	0.79	-0.6
3,835,494	-				-3.0
3,835,537	-				+0.5
3,835,550	+				-1.1
3,835,567	+				-0.9
3,835,568	-				-1.3
3,835,714	-				-1.1
3,835,748	+				-0.6
3,835,851	-		CA265_RS15255	0.14	+1.0
3,835,861	+		CA265_RS15255	0.15	-0.0
3,835,861	+		CA265_RS15255	0.15	+0.8
3,835,862	-		CA265_RS15255	0.15	+0.1
3,835,872	+		CA265_RS15255	0.17	-0.2
3,835,873	-		CA265_RS15255	0.17	-1.4
3,835,892	+		CA265_RS15255	0.19	+0.9
3,835,893	-		CA265_RS15255	0.19	+0.4
3,835,972	+		CA265_RS15255	0.27	+0.4
3,835,972	+		CA265_RS15255	0.27	-1.5
3,835,972	+		CA265_RS15255	0.27	+0.4
3,835,972	+		CA265_RS15255	0.27	+0.2
3,835,972	+		CA265_RS15255	0.27	-0.5
3,835,973	-		CA265_RS15255	0.27	+0.0
3,835,973	-		CA265_RS15255	0.27	+0.2
3,835,973	-		CA265_RS15255	0.27	+0.5
3,835,974	+		CA265_RS15255	0.27	+3.0
3,836,003	-		CA265_RS15255	0.30	+1.0
3,836,010	-		CA265_RS15255	0.31	+0.0
3,836,077	-		CA265_RS15255	0.38	+0.2
3,836,172	-		CA265_RS15255	0.48	+0.1
3,836,174	+		CA265_RS15255	0.48	+0.5
3,836,175	-		CA265_RS15255	0.48	+0.3
3,836,199	+		CA265_RS15255	0.51	+0.8
3,836,203	-		CA265_RS15255	0.51	+0.2
3,836,216	+		CA265_RS15255	0.52	+0.6
3,836,217	-		CA265_RS15255	0.53	+0.3
3,836,229	-		CA265_RS15255	0.54	+0.2
3,836,239	-		CA265_RS15255	0.55	-0.1
3,836,265	-		CA265_RS15255	0.58	+1.2
3,836,297	+		CA265_RS15255	0.61	-0.1
3,836,346	+		CA265_RS15255	0.66	-0.6
3,836,347	-		CA265_RS15255	0.66	-1.3
3,836,347	-		CA265_RS15255	0.66	+1.9
3,836,378	-		CA265_RS15255	0.69	+1.2
3,836,406	+		CA265_RS15255	0.72	-0.4
3,836,410	+		CA265_RS15255	0.73	-0.6
3,836,416	-		CA265_RS15255	0.73	+0.1
3,836,444	+		CA265_RS15255	0.76	+0.4
3,836,467	-		CA265_RS15255	0.79	+0.5