Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14625

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
3,680,588	-		CA265_RS14610	0.89	+0.4
3,680,633	+				+0.1
3,680,739	+				-0.6
3,680,740	-				-0.3
3,680,805	-				+0.0
3,680,805	-				-0.3
3,680,807	+				+0.6
3,680,807	+				-0.3
3,680,861	-		CA265_RS14615	0.15	-0.2
3,680,883	+		CA265_RS14615	0.27	-0.2
3,680,890	+		CA265_RS14615	0.31	-1.1
3,680,919	-		CA265_RS14615	0.47	+0.2
3,680,963	+		CA265_RS14615	0.72	-1.0
3,680,969	+		CA265_RS14615	0.75	-0.2
3,680,970	-		CA265_RS14615	0.76	-0.3
3,681,017	-				-1.0
3,681,019	-				-1.0
3,681,023	+				-0.5
3,681,024	-				-0.2
3,681,062	+				-0.0
3,681,062	+				+2.1
3,681,072	-		CA265_RS14620	0.10	+0.9
3,681,078	-		CA265_RS14620	0.11	-0.0
3,681,094	-		CA265_RS14620	0.15	-0.1
3,681,159	+		CA265_RS14620	0.28	-0.2
3,681,210	-		CA265_RS14620	0.39	+0.3
3,681,215	-		CA265_RS14620	0.40	-0.5
3,681,289	-		CA265_RS14620	0.56	+0.2
3,681,289	-		CA265_RS14620	0.56	-2.0
3,681,338	+		CA265_RS14620	0.66	+0.4
3,681,476	-				-0.8
3,681,479	+				-1.7
3,681,564	-		CA265_RS14625	0.10	-1.6
3,681,564	-		CA265_RS14625	0.10	-2.2
3,681,564	-		CA265_RS14625	0.10	-3.4
3,681,583	-		CA265_RS14625	0.14	-2.9
3,681,583	-		CA265_RS14625	0.14	-0.9
3,681,618	-		CA265_RS14625	0.19	-3.1
3,681,621	-		CA265_RS14625	0.20	-2.0
3,681,624	+		CA265_RS14625	0.20	-0.7
3,681,641	+		CA265_RS14625	0.23	-2.3
3,681,705	-		CA265_RS14625	0.34	-2.4
3,681,726	-		CA265_RS14625	0.37	-2.2
3,681,730	-		CA265_RS14625	0.38	-0.6
3,681,730	-		CA265_RS14625	0.38	-3.3
3,681,797	-		CA265_RS14625	0.49	-2.0
3,681,810	+		CA265_RS14625	0.51	-3.1
3,681,819	-		CA265_RS14625	0.53	-3.5
3,681,822	+		CA265_RS14625	0.53	-2.9
3,681,855	-		CA265_RS14625	0.59	-1.9
3,681,871	+		CA265_RS14625	0.61	-2.0
3,681,877	+		CA265_RS14625	0.62	-2.3
3,681,880	-		CA265_RS14625	0.63	-2.0
3,681,926	+		CA265_RS14625	0.71	-2.6
3,681,927	-		CA265_RS14625	0.71	-2.4
3,681,928	+		CA265_RS14625	0.71	-2.3
3,681,928	+		CA265_RS14625	0.71	-3.4
3,681,928	+		CA265_RS14625	0.71	-2.4
3,681,928	+		CA265_RS14625	0.71	-1.1
3,681,928	+		CA265_RS14625	0.71	-1.8
3,681,932	+		CA265_RS14625	0.72	-3.1
3,681,989	-		CA265_RS14625	0.81	-2.1
3,681,990	-		CA265_RS14625	0.81	-2.0
3,681,990	-		CA265_RS14625	0.81	-3.8
3,681,993	+		CA265_RS14625	0.82	-3.4
3,681,994	-		CA265_RS14625	0.82	-0.8
3,682,047	-				-3.4
3,682,053	+				+1.9
3,682,100	-				-0.3
3,682,100	-				-0.2
3,682,100	-				+0.1
3,682,156	-				+1.5
3,682,199	+		CA265_RS14630	0.12	+0.7
3,682,305	+		CA265_RS14630	0.23	+0.4
3,682,362	+		CA265_RS14630	0.29	+0.5
3,682,390	-		CA265_RS14630	0.32	+0.0
3,682,393	-		CA265_RS14630	0.33	-0.3
3,682,394	+		CA265_RS14630	0.33	+0.2
3,682,402	+		CA265_RS14630	0.34	+0.1
3,682,433	+		CA265_RS14630	0.37	+0.0
3,682,496	-		CA265_RS14630	0.44	+0.6
3,682,557	+		CA265_RS14630	0.50	+0.1
3,682,569	-		CA265_RS14630	0.52	+0.0
3,682,598	+		CA265_RS14630	0.55	+0.1
3,682,598	+		CA265_RS14630	0.55	+0.6
3,682,599	-				-0.1
3,682,613	-		CA265_RS14630	0.56	+0.2
3,682,662	-		CA265_RS14630	0.62	-0.3
3,682,662	-		CA265_RS14630	0.62	+0.2
3,682,707	+		CA265_RS14630	0.67	+0.3
3,682,708	-		CA265_RS14630	0.67	-0.3
3,682,708	-		CA265_RS14630	0.67	-0.6
3,682,722	+		CA265_RS14630	0.68	+0.2
3,682,776	+		CA265_RS14630	0.74	-0.3
3,682,796	+		CA265_RS14630	0.76	+0.7
3,682,820	-		CA265_RS14630	0.79	-0.2
3,682,875	+		CA265_RS14630	0.85	+0.4
3,682,934	-				-0.6
3,682,938	+				+0.3
3,682,938	+				+0.5
3,682,940	+				-0.3
3,683,007	+				-0.0
3,683,008	-				+0.4
3,683,008	-				-0.7
3,683,008	-				+0.0
3,683,008	-				+0.9
3,683,049	-				-0.3
3,683,059	+				-0.1
3,683,060	-				-0.4
3,683,078	+				+0.6
3,683,080	+				-1.0