Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14535
Experiment: R2A with A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with A22 0.02 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,660,838 | - | -0.3 | |||
3,660,905 | + | -1.5 | |||
3,660,922 | - | CA265_RS14530 | 0.10 | -0.8 | |
3,660,934 | - | CA265_RS14530 | 0.12 | -1.1 | |
3,661,031 | - | +0.9 | |||
3,661,345 | + | CA265_RS14530 | 0.60 | +0.3 | |
3,661,414 | + | CA265_RS14530 | 0.69 | -3.0 | |
3,661,475 | + | CA265_RS14530 | 0.76 | +1.0 | |
3,661,691 | - | +0.2 | |||
3,661,718 | - | -0.7 | |||
3,661,730 | - | +0.3 | |||
3,661,753 | - | -0.0 | |||
3,661,757 | + | +0.2 | |||
3,661,757 | + | -0.3 | |||
3,661,759 | + | +1.5 | |||
3,661,913 | - | CA265_RS14535 | 0.24 | -1.0 | |
3,662,170 | - | CA265_RS14535 | 0.88 | -2.1 | |
3,662,171 | + | CA265_RS14535 | 0.89 | -0.2 | |
3,662,171 | + | CA265_RS14535 | 0.89 | -0.7 | |
3,662,186 | - | +0.2 | |||
3,662,202 | - | +0.4 | |||
3,662,239 | - | +0.4 | |||
3,662,245 | - | -0.1 | |||
3,662,307 | + | +0.4 | |||
3,662,318 | + | -0.0 | |||
3,662,318 | + | -1.5 | |||
3,662,344 | + | +0.8 |
Or see this region's nucleotide sequence