Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13985

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
3,518,963	+				+0.0
3,518,964	-				+0.5
3,518,964	-				-0.8
3,518,993	+				+0.1
3,518,997	-				-0.4
3,518,997	-				-0.4
3,519,001	-				-0.6
3,519,006	+				-0.7
3,519,007	-				-0.1
3,519,085	-				-0.1
3,519,179	-		CA265_RS13975	0.18	-0.0
3,519,203	+		CA265_RS13975	0.21	-0.7
3,519,274	+		CA265_RS13975	0.30	-0.8
3,519,275	-		CA265_RS13975	0.31	-1.2
3,519,275	-		CA265_RS13975	0.31	-0.3
3,519,277	+		CA265_RS13975	0.31	-0.4
3,519,314	+		CA265_RS13975	0.36	-0.8
3,519,314	+		CA265_RS13975	0.36	-1.1
3,519,314	+		CA265_RS13975	0.36	-0.1
3,519,315	-		CA265_RS13975	0.36	-0.2
3,519,375	+		CA265_RS13975	0.44	-1.4
3,519,406	+		CA265_RS13975	0.48	-0.1
3,519,469	-		CA265_RS13975	0.56	+0.2
3,519,553	-		CA265_RS13975	0.68	-0.1
3,519,937	+				-0.8
3,519,946	+				-1.3
3,520,044	+		CA265_RS13985	0.49	-0.1
3,520,044	+		CA265_RS13985	0.49	-1.8
3,520,044	+		CA265_RS13985	0.49	-0.4
3,520,116	+				-0.3
3,520,295	+				-0.5
3,520,319	+				+0.7
3,520,319	+				-0.6
3,520,319	+				+0.2
3,520,347	+				-0.4
3,520,451	+		CA265_RS13990	0.19	-0.3
3,520,452	-		CA265_RS13990	0.19	+0.4
3,520,475	-		CA265_RS13990	0.21	+0.4
3,520,597	+		CA265_RS13990	0.34	-0.5
3,520,598	-		CA265_RS13990	0.34	-0.1
3,520,601	+		CA265_RS13990	0.34	+0.1
3,520,624	-		CA265_RS13990	0.36	-0.2
3,520,695	+		CA265_RS13990	0.44	+0.4
3,520,699	+		CA265_RS13990	0.44	-0.2
3,520,788	+		CA265_RS13990	0.53	-0.2
3,520,894	+		CA265_RS13990	0.64	+0.8
3,520,934	+		CA265_RS13990	0.68	-0.4
3,520,941	+		CA265_RS13990	0.68	-0.0
3,520,941	+		CA265_RS13990	0.68	+0.5
3,520,951	+		CA265_RS13990	0.69	-0.1
3,521,007	+		CA265_RS13990	0.75	+0.0
3,521,008	-		CA265_RS13990	0.75	-0.7
3,521,008	-		CA265_RS13990	0.75	-1.4
3,521,018	+		CA265_RS13990	0.76	+0.1
3,521,018	+		CA265_RS13990	0.76	+0.2
3,521,019	-		CA265_RS13990	0.76	+1.0
3,521,082	-		CA265_RS13990	0.83	-1.1