Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13710

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
3,432,835	-				-0.1
3,432,838	+				+0.1
3,432,838	+				+0.9
3,432,928	+		CA265_RS13705	0.18	+0.0
3,432,986	-		CA265_RS13705	0.23	+2.3
3,432,992	+		CA265_RS13705	0.24	-0.5
3,433,049	-		CA265_RS13705	0.29	-0.2
3,433,179	-		CA265_RS13705	0.41	-0.4
3,433,208	+		CA265_RS13705	0.44	-1.4
3,433,271	+		CA265_RS13705	0.50	-0.1
3,433,271	+		CA265_RS13705	0.50	+0.3
3,433,272	-		CA265_RS13705	0.50	-0.8
3,433,316	+		CA265_RS13705	0.54	-0.1
3,433,316	+		CA265_RS13705	0.54	+0.5
3,433,317	-		CA265_RS13705	0.54	+0.2
3,433,406	+		CA265_RS13705	0.63	-0.6
3,433,407	-		CA265_RS13705	0.63	+0.7
3,433,407	-		CA265_RS13705	0.63	-0.6
3,433,407	-		CA265_RS13705	0.63	-0.2
3,433,462	+		CA265_RS13705	0.68	-0.2
3,433,551	+		CA265_RS13705	0.76	+0.3
3,433,586	+		CA265_RS13705	0.79	-0.2
3,433,587	-		CA265_RS13705	0.80	-1.1
3,433,606	+		CA265_RS13705	0.81	+0.1
3,433,664	-		CA265_RS13705	0.87	-0.5
3,433,752	-				-0.2
3,433,789	+				+0.1
3,433,795	+				+0.0
3,433,807	+				-0.8
3,433,811	-				-1.1
3,433,876	-		CA265_RS13710	0.18	-0.5
3,433,885	+		CA265_RS13710	0.21	+0.4
3,433,889	-		CA265_RS13710	0.22	-1.2
3,433,931	+		CA265_RS13710	0.33	-2.2
3,434,072	+		CA265_RS13710	0.70	-1.0
3,434,145	+		CA265_RS13710	0.89	-0.3
3,434,176	+				-0.0
3,434,241	+				-0.8
3,434,250	-				-1.6
3,434,263	-				-0.5
3,434,263	-				+0.2
3,434,341	-		CA265_RS13715	0.11	+0.8
3,434,419	+		CA265_RS13715	0.21	+0.0
3,434,419	+		CA265_RS13715	0.21	+0.7
3,434,420	-		CA265_RS13715	0.21	+0.1
3,434,420	-		CA265_RS13715	0.21	-0.3
3,434,539	+		CA265_RS13715	0.37	-1.7
3,434,586	-		CA265_RS13715	0.44	-0.2
3,434,669	-		CA265_RS13715	0.55	-0.4
3,434,700	-		CA265_RS13715	0.59	-0.3
3,434,768	+		CA265_RS13715	0.68	-0.7
3,434,830	+		CA265_RS13715	0.76	+0.2
3,434,841	-		CA265_RS13715	0.78	-1.7
3,434,889	-		CA265_RS13715	0.84	-0.2
3,434,889	-		CA265_RS13715	0.84	-0.3
3,434,915	+		CA265_RS13715	0.88	-0.6
3,434,965	+				+0.2
3,434,966	-				-1.6
3,434,966	-				-1.2
3,434,985	-				+0.2
3,435,035	-				+0.0
3,435,106	+		CA265_RS13720	0.41	-0.8
3,435,107	-		CA265_RS13720	0.42	-0.4
3,435,172	+		CA265_RS13720	0.71	+0.2