Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13025

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
3,241,043	-		CA265_RS13015	0.83	-0.5
3,241,056	-		CA265_RS13015	0.84	-0.0
3,241,077	-		CA265_RS13015	0.85	-0.3
3,241,108	+		CA265_RS13015	0.87	+0.0
3,241,207	-				-0.0
3,241,218	-				+0.1
3,241,250	+				-1.0
3,241,270	-				-0.7
3,241,286	+				-2.0
3,241,294	+				-0.1
3,241,294	+				+0.2
3,241,344	+				+0.3
3,241,348	+				-0.5
3,241,360	-				+0.4
3,241,360	-				+0.5
3,241,362	-				-1.4
3,241,392	-				-0.4
3,241,439	-		CA265_RS13020	0.11	-0.1
3,241,523	-		CA265_RS13020	0.24	-0.7
3,241,615	-		CA265_RS13020	0.39	+0.2
3,241,821	+		CA265_RS13020	0.71	+0.7
3,241,825	+		CA265_RS13020	0.72	-0.3
3,241,826	-		CA265_RS13020	0.72	+0.5
3,241,840	+		CA265_RS13020	0.74	-0.4
3,241,840	+		CA265_RS13020	0.74	+0.3
3,241,843	+		CA265_RS13020	0.75	+0.0
3,241,844	-		CA265_RS13020	0.75	+0.6
3,241,844	-		CA265_RS13020	0.75	-0.2
3,241,870	-		CA265_RS13020	0.79	-0.1
3,241,915	+		CA265_RS13020	0.86	+0.7
3,241,958	-				+0.5
3,241,958	-				+0.4
3,242,013	+				-0.2
3,242,014	-				-0.1
3,242,062	-				-0.8
3,242,104	-				+0.1
3,242,140	+				+0.1
3,242,172	-		CA265_RS13025	0.13	-0.4
3,242,193	+		CA265_RS13025	0.15	-1.4
3,242,219	-		CA265_RS13025	0.17	-0.6
3,242,243	+		CA265_RS13025	0.19	-1.0
3,242,244	-		CA265_RS13025	0.19	-1.0
3,242,307	-		CA265_RS13025	0.25	-2.4
3,242,307	-		CA265_RS13025	0.25	-0.1
3,242,375	+		CA265_RS13025	0.31	-1.3
3,242,381	+		CA265_RS13025	0.32	-0.3
3,242,381	+		CA265_RS13025	0.32	-1.4
3,242,382	-		CA265_RS13025	0.32	+0.2
3,242,427	-		CA265_RS13025	0.36	-1.5
3,242,436	-		CA265_RS13025	0.37	-1.0
3,242,458	-		CA265_RS13025	0.39	-1.2
3,242,480	+		CA265_RS13025	0.41	-1.1
3,242,505	-		CA265_RS13025	0.43	-0.6
3,242,555	+		CA265_RS13025	0.48	-1.3
3,242,556	-		CA265_RS13025	0.48	-0.1
3,242,556	-		CA265_RS13025	0.48	-0.4
3,242,557	+		CA265_RS13025	0.48	-1.2
3,242,557	+		CA265_RS13025	0.48	-1.0
3,242,557	+		CA265_RS13025	0.48	-2.1
3,242,557	+		CA265_RS13025	0.48	-0.5
3,242,558	-		CA265_RS13025	0.48	-0.2
3,242,654	-		CA265_RS13025	0.57	+0.1
3,242,705	+		CA265_RS13025	0.61	-0.6
3,242,768	-		CA265_RS13025	0.67	-1.9
3,242,841	-		CA265_RS13025	0.74	-0.5
3,242,844	+		CA265_RS13025	0.74	-2.0
3,242,894	+		CA265_RS13025	0.78	-1.2
3,242,953	-		CA265_RS13025	0.84	-0.4
3,242,955	+		CA265_RS13025	0.84	-1.5
3,242,960	+		CA265_RS13025	0.84	-3.0
3,242,961	-		CA265_RS13025	0.84	-1.6
3,242,969	-		CA265_RS13025	0.85	+0.6
3,243,009	+		CA265_RS13025	0.89	-1.5
3,243,010	-		CA265_RS13025	0.89	-0.3
3,243,015	+		CA265_RS13025	0.89	+0.0
3,243,016	-		CA265_RS13025	0.89	-1.5
3,243,054	+				-2.2
3,243,165	-				-1.2
3,243,170	-				-1.1
3,243,202	-				-0.6
3,243,238	+				-0.1
3,243,238	+				-0.7
3,243,291	-				+0.2
3,243,293	-				+0.1
3,243,327	+				+0.1
3,243,379	+				-0.7
3,243,403	+				+0.1
3,243,425	+				-1.1
3,243,543	-		CA265_RS13030	0.14	+0.4
3,243,543	-		CA265_RS13030	0.14	-2.1
3,243,544	-		CA265_RS13030	0.14	-1.5
3,243,562	+		CA265_RS13030	0.15	+0.4
3,243,573	+		CA265_RS13030	0.16	-0.0
3,243,574	-		CA265_RS13030	0.16	-1.6
3,243,581	-		CA265_RS13030	0.17	-0.5
3,243,684	+		CA265_RS13030	0.26	-0.7
3,243,725	+		CA265_RS13030	0.30	-2.6
3,243,775	-		CA265_RS13030	0.34	-1.3
3,243,784	-		CA265_RS13030	0.35	-1.5
3,243,833	+		CA265_RS13030	0.39	-0.9
3,243,852	+		CA265_RS13030	0.41	-0.9
3,243,859	-		CA265_RS13030	0.41	-0.0
3,243,859	-		CA265_RS13030	0.41	-1.7
3,243,859	-		CA265_RS13030	0.41	-1.2
3,243,859	-		CA265_RS13030	0.41	+0.1
3,243,980	-		CA265_RS13030	0.52	-1.4
3,243,980	-		CA265_RS13030	0.52	-1.1
3,243,982	-		CA265_RS13030	0.52	-0.9
3,243,992	-		CA265_RS13030	0.53	-1.2
3,243,992	-		CA265_RS13030	0.53	-0.7
3,244,014	-		CA265_RS13030	0.55	-0.9
3,244,083	+		CA265_RS13030	0.61	-3.4
3,244,084	-		CA265_RS13030	0.61	-1.2