Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10530

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
2,605,615	+		CA265_RS10525	0.32	-0.1
2,605,616	-		CA265_RS10525	0.32	+0.8
2,605,627	-		CA265_RS10525	0.33	+0.4
2,605,638	-		CA265_RS10525	0.34	-0.2
2,605,719	-		CA265_RS10525	0.42	+0.0
2,605,763	+		CA265_RS10525	0.46	-0.2
2,605,764	-		CA265_RS10525	0.46	+0.9
2,605,883	+		CA265_RS10525	0.58	+0.6
2,605,908	-		CA265_RS10525	0.60	-0.1
2,605,940	-		CA265_RS10525	0.63	-0.1
2,606,062	+		CA265_RS10525	0.75	+0.1
2,606,062	+		CA265_RS10525	0.75	+0.6
2,606,063	-		CA265_RS10525	0.75	-0.2
2,606,088	+		CA265_RS10525	0.78	-0.5
2,606,090	+		CA265_RS10525	0.78	-0.9
2,606,132	+		CA265_RS10525	0.82	+0.0
2,606,182	-		CA265_RS10525	0.87	+0.2
2,606,189	-		CA265_RS10525	0.87	-0.2
2,606,211	+		CA265_RS10525	0.89	+0.8
2,606,251	+				+0.5
2,606,263	-				-0.6
2,606,264	+				-0.5
2,606,265	-				+0.1
2,606,285	+				+0.2
2,606,286	-				-0.2
2,606,300	+				-0.0
2,606,376	-				-0.0
2,606,379	-				-0.6
2,606,394	-				-1.2
2,606,461	+				-0.4
2,606,518	+				-0.7
2,606,554	-				-0.0
2,606,600	+				+0.2
2,606,601	-				-1.7
2,606,605	+				-0.9
2,606,692	+				-0.4
2,606,840	-		CA265_RS10530	0.11	-1.8
2,606,970	-		CA265_RS10530	0.17	-1.3
2,607,026	-		CA265_RS10530	0.20	-0.8
2,607,026	-		CA265_RS10530	0.20	-0.8
2,607,055	-		CA265_RS10530	0.21	+0.2
2,607,055	-		CA265_RS10530	0.21	-0.8
2,607,229	-		CA265_RS10530	0.29	-1.4
2,607,268	+		CA265_RS10530	0.31	-0.6
2,607,269	-		CA265_RS10530	0.31	+0.5
2,607,281	+		CA265_RS10530	0.32	+1.2
2,607,403	-		CA265_RS10530	0.37	-1.3
2,607,503	+		CA265_RS10530	0.42	-0.6
2,607,503	+		CA265_RS10530	0.42	-0.2
2,607,539	+		CA265_RS10530	0.44	+0.2
2,607,540	-		CA265_RS10530	0.44	-0.8
2,607,584	-		CA265_RS10530	0.46	-0.1
2,607,584	-		CA265_RS10530	0.46	-0.2
2,607,604	+		CA265_RS10530	0.47	-2.6
2,607,638	-		CA265_RS10530	0.48	-2.0
2,607,667	-		CA265_RS10530	0.50	-0.6
2,607,918	+		CA265_RS10530	0.62	-1.1
2,607,928	+		CA265_RS10530	0.62	-0.6
2,607,956	+		CA265_RS10530	0.63	+0.0
2,607,957	-		CA265_RS10530	0.63	-1.1
2,608,168	-		CA265_RS10530	0.73	-0.2
2,608,174	+		CA265_RS10530	0.74	+0.2
2,608,194	+		CA265_RS10530	0.74	-1.0
2,608,231	-		CA265_RS10530	0.76	-3.5
2,608,232	+		CA265_RS10530	0.76	-1.8
2,608,240	+		CA265_RS10530	0.77	+0.6
2,608,277	+		CA265_RS10530	0.78	-0.5
2,608,277	+		CA265_RS10530	0.78	+0.2
2,608,278	-		CA265_RS10530	0.78	+1.2
2,608,318	-		CA265_RS10530	0.80	-1.2
2,608,335	+		CA265_RS10530	0.81	-3.6
2,608,343	+		CA265_RS10530	0.81	-1.5
2,608,347	+		CA265_RS10530	0.82	-0.9
2,608,347	+		CA265_RS10530	0.82	-1.1
2,608,348	-		CA265_RS10530	0.82	-0.1
2,608,348	-		CA265_RS10530	0.82	-0.2
2,608,444	+		CA265_RS10530	0.86	-0.9
2,608,471	-		CA265_RS10530	0.87	-0.6
2,608,532	+				+0.7
2,608,533	-				-0.7
2,608,584	+				-1.3
2,608,585	-				-2.8
2,608,585	-				-1.5
2,608,585	-				-0.9
2,608,625	-				-0.6
2,608,781	+				-0.8