Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09640

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
2,380,727	-		CA265_RS09630	0.73	-0.4
2,380,777	+		CA265_RS09630	0.78	+0.8
2,380,799	-		CA265_RS09630	0.80	-0.2
2,380,883	+		CA265_RS09630	0.87	-1.3
2,380,884	-		CA265_RS09630	0.87	+0.0
2,380,916	+		CA265_RS09630	0.89	+0.8
2,380,926	+				+0.3
2,380,931	+				+0.6
2,380,932	-				+0.4
2,380,932	-				+0.2
2,380,932	-				-0.0
2,380,991	-				+0.9
2,381,027	-				+0.2
2,381,077	+				-0.5
2,381,099	-				-0.6
2,381,143	+				-0.5
2,381,186	+				+1.0
2,381,187	-				+0.7
2,381,228	+		CA265_RS09635	0.12	-0.5
2,381,232	+		CA265_RS09635	0.13	+0.3
2,381,233	-		CA265_RS09635	0.13	-0.7
2,381,262	+		CA265_RS09635	0.21	-0.4
2,381,313	-		CA265_RS09635	0.33	-1.4
2,381,399	-		CA265_RS09635	0.55	+0.0
2,381,464	+		CA265_RS09635	0.71	-0.2
2,381,469	+		CA265_RS09635	0.72	-1.3
2,381,550	-				-0.6
2,381,555	+				+0.3
2,381,600	+				+0.3
2,381,605	-				+0.2
2,381,610	+				-0.2
2,381,710	+				+0.0
2,381,749	-		CA265_RS09640	0.16	-0.6
2,381,919	+		CA265_RS09640	0.61	-0.8
2,381,963	+		CA265_RS09640	0.72	-0.8
2,382,142	-				-0.2
2,382,152	+				-0.6
2,382,159	-				+0.2
2,382,194	+		CA265_RS09645	0.10	+0.5
2,382,195	-		CA265_RS09645	0.11	-0.9
2,382,195	-		CA265_RS09645	0.11	+0.5
2,382,198	-		CA265_RS09645	0.12	-0.5
2,382,238	-		CA265_RS09645	0.31	+0.1
2,382,284	+		CA265_RS09645	0.53	+0.7
2,382,284	+		CA265_RS09645	0.53	-0.5
2,382,285	-		CA265_RS09645	0.53	+0.0
2,382,322	+		CA265_RS09645	0.70	-0.1
2,382,457	+				-0.1
2,382,457	+				+0.1
2,382,582	+		CA265_RS09650	0.11	-1.6
2,382,802	-		CA265_RS09650	0.29	+0.7
2,382,986	+		CA265_RS09650	0.45	+2.8