Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09020

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
2,248,341	+				-0.3
2,248,360	+				+0.6
2,248,528	+				+0.6
2,248,582	+				+0.4
2,248,583	-				+0.8
2,248,583	-				+0.2
2,248,607	+				+0.0
2,248,666	+		CA265_RS09015	0.18	+1.2
2,248,669	-		CA265_RS09015	0.18	-0.3
2,248,669	-		CA265_RS09015	0.18	+1.3
2,248,669	-		CA265_RS09015	0.18	-0.7
2,248,754	-		CA265_RS09015	0.34	-0.0
2,248,755	+		CA265_RS09015	0.34	-0.0
2,248,756	-		CA265_RS09015	0.35	+1.2
2,248,780	+		CA265_RS09015	0.39	-1.9
2,248,819	+		CA265_RS09015	0.47	+0.9
2,248,822	-		CA265_RS09015	0.47	-1.4
2,248,866	-		CA265_RS09015	0.56	+1.2
2,248,959	+		CA265_RS09015	0.73	-1.2
2,249,005	+		CA265_RS09015	0.82	+1.0
2,249,021	-		CA265_RS09015	0.85	+0.7
2,249,022	+		CA265_RS09015	0.85	+2.2
2,249,033	-		CA265_RS09015	0.87	-0.5
2,249,056	+				-0.2
2,249,056	+				-0.1
2,249,066	+				+0.2
2,249,071	+				+0.3
2,249,082	+				-0.6
2,249,143	+				-0.1
2,249,166	-				-0.2
2,249,213	-				-0.6
2,249,222	+				-0.0
2,249,235	+				-0.0
2,249,268	+				+0.0
2,249,359	+		CA265_RS09020	0.12	-1.9
2,249,396	+		CA265_RS09020	0.17	-0.6
2,249,402	+		CA265_RS09020	0.17	-2.3
2,249,449	-		CA265_RS09020	0.23	-1.6
2,249,480	-		CA265_RS09020	0.27	-2.4
2,249,510	+		CA265_RS09020	0.31	-3.1
2,249,532	+		CA265_RS09020	0.34	-1.7
2,249,533	-		CA265_RS09020	0.34	-3.3
2,249,533	-		CA265_RS09020	0.34	-0.4
2,249,609	+		CA265_RS09020	0.44	-1.4
2,249,668	+		CA265_RS09020	0.51	-3.1
2,249,737	+		CA265_RS09020	0.60	-1.6
2,249,802	-		CA265_RS09020	0.69	-3.2
2,249,811	+		CA265_RS09020	0.70	-2.8
2,249,812	-		CA265_RS09020	0.70	-0.4
2,249,880	+		CA265_RS09020	0.79	-2.9
2,249,948	+		CA265_RS09020	0.87	-1.5
2,250,087	-				-0.2
2,250,119	-				-0.2
2,250,141	+				-1.0
2,250,219	+				-0.0
2,250,320	+		CA265_RS09025	0.18	-0.8
2,250,355	-		CA265_RS09025	0.21	-0.1
2,250,365	+		CA265_RS09025	0.22	-0.5
2,250,386	+		CA265_RS09025	0.25	+0.0
2,250,387	-		CA265_RS09025	0.25	-1.5
2,250,528	-		CA265_RS09025	0.39	-0.7
2,250,582	+		CA265_RS09025	0.45	+0.6
2,250,584	+		CA265_RS09025	0.45	+0.2
2,250,584	+		CA265_RS09025	0.45	-0.3
2,250,585	-		CA265_RS09025	0.45	+0.3
2,250,593	-		CA265_RS09025	0.46	-0.6
2,250,750	-		CA265_RS09025	0.62	-0.3
2,250,750	-		CA265_RS09025	0.62	-0.7
2,250,750	-		CA265_RS09025	0.62	+0.5
2,250,791	+		CA265_RS09025	0.67	-0.6
2,250,835	+		CA265_RS09025	0.71	+0.1
2,250,839	+		CA265_RS09025	0.72	-1.4
2,250,857	-		CA265_RS09025	0.74	-0.2
2,250,902	-		CA265_RS09025	0.78	-0.5
2,250,936	-		CA265_RS09025	0.82	+0.1
2,250,948	-		CA265_RS09025	0.83	-0.5
2,250,961	+		CA265_RS09025	0.84	+1.2
2,251,031	+				-0.7
2,251,031	+				-1.6