Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08910

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
2,226,162	-		CA265_RS08905	0.66	-1.8
2,226,223	+		CA265_RS08905	0.68	+0.2
2,226,237	-		CA265_RS08905	0.69	-0.4
2,226,325	+		CA265_RS08905	0.73	+0.2
2,226,325	+		CA265_RS08905	0.73	-0.1
2,226,477	+		CA265_RS08905	0.80	+1.9
2,226,577	+		CA265_RS08905	0.85	-0.4
2,226,903	+				-2.1
2,226,994	+				+0.8
2,226,995	-				+0.2
2,226,999	-				-2.1
2,227,012	+				-2.6
2,227,085	+		CA265_RS08910	0.11	-2.8
2,227,182	-		CA265_RS08910	0.23	-1.7
2,227,268	+		CA265_RS08910	0.33	-1.6
2,227,269	-		CA265_RS08910	0.33	-1.4
2,227,321	+		CA265_RS08910	0.40	-0.7
2,227,322	-		CA265_RS08910	0.40	-1.3
2,227,496	+		CA265_RS08910	0.61	-3.8
2,227,583	+		CA265_RS08910	0.72	-1.8
2,227,621	+		CA265_RS08910	0.77	-2.8
2,227,690	+		CA265_RS08910	0.85	-2.3
2,227,742	+				-1.9
2,227,743	-				-2.8
2,227,747	+				-1.8
2,227,775	-				-2.1
2,227,802	+				-0.4
2,227,802	+				+1.1
2,227,803	-				-2.1
2,227,872	-				-0.6
2,227,890	+		CA265_RS08915	0.11	-0.1
2,227,939	+		CA265_RS08915	0.17	-0.2
2,227,940	-		CA265_RS08915	0.18	-0.0
2,227,943	+		CA265_RS08915	0.18	-0.1
2,227,944	-		CA265_RS08915	0.18	-1.6
2,227,944	-		CA265_RS08915	0.18	-1.1
2,227,946	+		CA265_RS08915	0.18	+0.4
2,227,947	-		CA265_RS08915	0.19	-0.7
2,227,947	-		CA265_RS08915	0.19	-1.3
2,227,966	+		CA265_RS08915	0.21	+0.3
2,227,995	+		CA265_RS08915	0.25	-0.7
2,227,996	-		CA265_RS08915	0.25	-0.3
2,228,028	+		CA265_RS08915	0.30	+0.6
2,228,139	+		CA265_RS08915	0.45	+1.0
2,228,140	-		CA265_RS08915	0.46	+0.5
2,228,211	+		CA265_RS08915	0.56	-0.5
2,228,298	+		CA265_RS08915	0.68	+0.2
2,228,325	-		CA265_RS08915	0.71	-0.2
2,228,325	-		CA265_RS08915	0.71	-1.6
2,228,386	-		CA265_RS08915	0.80	+0.4
2,228,403	-		CA265_RS08915	0.82	-0.6
2,228,506	+				+0.1
2,228,510	-				+1.3
2,228,549	+				+0.3
2,228,631	-		CA265_RS08920	0.20	+0.6
2,228,631	-		CA265_RS08920	0.20	-0.0
2,228,633	+		CA265_RS08920	0.21	+0.7
2,228,633	+		CA265_RS08920	0.21	-0.7
2,228,643	+		CA265_RS08920	0.23	+0.2
2,228,690	+		CA265_RS08920	0.35	-0.4
2,228,691	-		CA265_RS08920	0.35	+0.2
2,228,691	-		CA265_RS08920	0.35	-0.3
2,228,725	-		CA265_RS08920	0.43	+0.8
2,228,732	+		CA265_RS08920	0.45	+1.2