Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06290

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
1,543,642	-		CA265_RS06280	0.56	-0.5
1,543,673	+		CA265_RS06280	0.63	-0.8
1,543,682	+		CA265_RS06280	0.65	-0.3
1,543,682	+		CA265_RS06280	0.65	-0.0
1,543,686	+		CA265_RS06280	0.66	-1.1
1,543,686	+		CA265_RS06280	0.66	+0.0
1,543,797	-		CA265_RS06280	0.89	+0.3
1,543,939	-		CA265_RS06285	0.13	-0.5
1,543,950	-		CA265_RS06285	0.15	-0.5
1,544,078	+		CA265_RS06285	0.33	-0.2
1,544,115	-		CA265_RS06285	0.38	+0.9
1,544,145	+		CA265_RS06285	0.42	+0.1
1,544,203	+		CA265_RS06285	0.51	-0.3
1,544,215	-		CA265_RS06285	0.52	-0.5
1,544,294	+		CA265_RS06285	0.64	-1.8
1,544,294	+		CA265_RS06285	0.64	+0.1
1,544,295	-		CA265_RS06285	0.64	+0.1
1,544,327	+		CA265_RS06285	0.68	-0.7
1,544,337	+		CA265_RS06285	0.70	-1.0
1,544,348	+		CA265_RS06285	0.71	+0.3
1,544,349	-		CA265_RS06285	0.71	-1.2
1,544,387	+		CA265_RS06285	0.77	-0.5
1,544,440	+		CA265_RS06285	0.84	-1.7
1,544,440	+		CA265_RS06285	0.84	-2.0
1,544,440	+		CA265_RS06285	0.84	+0.2
1,544,460	+		CA265_RS06285	0.87	-0.6
1,544,522	-				-0.7
1,544,541	+				-0.3
1,545,119	-		CA265_RS06290	0.89	-1.7
1,545,153	-				+0.2
1,545,180	+				+0.7
1,545,188	+				+0.7
1,545,189	-				-0.9
1,545,258	-				-0.2
1,545,281	+				+0.3
1,545,349	-				+0.6
1,545,402	+				+0.4
1,545,471	+		CA265_RS06295	0.12	-1.3
1,545,483	+		CA265_RS06295	0.13	-0.9
1,545,527	+		CA265_RS06295	0.14	-0.4
1,545,529	+		CA265_RS06295	0.15	-1.8
1,545,654	+		CA265_RS06295	0.20	-0.0
1,545,691	-		CA265_RS06295	0.21	-0.2
1,545,747	+		CA265_RS06295	0.24	+0.1
1,545,777	+		CA265_RS06295	0.25	+0.1
1,545,777	+		CA265_RS06295	0.25	-0.2
1,545,778	-		CA265_RS06295	0.25	-0.4
1,545,799	-		CA265_RS06295	0.26	+0.9
1,545,886	-		CA265_RS06295	0.30	-0.5
1,545,888	+		CA265_RS06295	0.30	-1.1
1,545,888	+		CA265_RS06295	0.30	-0.6
1,545,947	+		CA265_RS06295	0.32	+1.3
1,545,989	-		CA265_RS06295	0.34	+1.1
1,546,074	-		CA265_RS06295	0.37	+0.2
1,546,097	+		CA265_RS06295	0.38	-0.9
1,546,161	-		CA265_RS06295	0.41	+0.5
1,546,164	+		CA265_RS06295	0.41	+0.3
1,546,164	+		CA265_RS06295	0.41	-0.8
1,546,170	+		CA265_RS06295	0.41	+0.0