Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05705

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
1,385,918	-				+0.7
1,385,954	+		CA265_RS05700	0.13	-0.6
1,385,954	+		CA265_RS05700	0.13	-0.9
1,385,954	+		CA265_RS05700	0.13	-0.6
1,385,969	+		CA265_RS05700	0.15	-1.2
1,385,970	-		CA265_RS05700	0.15	+0.1
1,386,026	+		CA265_RS05700	0.21	-0.5
1,386,041	-		CA265_RS05700	0.23	-0.1
1,386,041	-				+0.7
1,386,081	-		CA265_RS05700	0.27	+0.5
1,386,139	+		CA265_RS05700	0.33	-1.1
1,386,140	-		CA265_RS05700	0.34	-0.3
1,386,146	-		CA265_RS05700	0.34	+0.7
1,386,167	-		CA265_RS05700	0.36	+0.5
1,386,167	-		CA265_RS05700	0.36	-0.5
1,386,167	-		CA265_RS05700	0.36	+0.7
1,386,274	+		CA265_RS05700	0.48	-1.0
1,386,300	+		CA265_RS05700	0.51	+0.4
1,386,305	+		CA265_RS05700	0.52	-1.0
1,386,306	-		CA265_RS05700	0.52	+1.2
1,386,311	-		CA265_RS05700	0.52	-0.1
1,386,338	+		CA265_RS05700	0.55	-0.2
1,386,349	+		CA265_RS05700	0.56	+0.2
1,386,427	+		CA265_RS05700	0.65	-1.3
1,386,503	-		CA265_RS05700	0.73	-0.2
1,386,565	+		CA265_RS05700	0.80	-0.7
1,386,566	-		CA265_RS05700	0.80	-0.7
1,386,579	-		CA265_RS05700	0.81	-0.1
1,386,592	-		CA265_RS05700	0.83	+0.2
1,386,592	-		CA265_RS05700	0.83	-0.3
1,386,593	+		CA265_RS05700	0.83	+0.6
1,386,594	-		CA265_RS05700	0.83	-1.2
1,386,602	-		CA265_RS05700	0.84	-0.7
1,386,610	+		CA265_RS05700	0.85	-0.1
1,386,735	-				-0.2
1,386,745	+				+0.2
1,386,748	-				+0.4
1,386,791	-				-0.0
1,386,795	-				-3.3
1,386,795	-				-0.1
1,386,797	-				+0.2
1,386,799	-				+0.1
1,386,799	-				-0.6
1,386,799	-				-0.1
1,386,799	-				+0.4
1,386,900	+				-1.7
1,386,931	+		CA265_RS05705	0.11	-1.2
1,387,044	+		CA265_RS05705	0.18	+1.9
1,387,092	+		CA265_RS05705	0.21	-0.3
1,387,093	-		CA265_RS05705	0.21	-0.1
1,387,135	+		CA265_RS05705	0.23	-0.3
1,387,136	-		CA265_RS05705	0.23	-1.1
1,387,181	-		CA265_RS05705	0.26	-0.1
1,387,181	-		CA265_RS05705	0.26	-0.7
1,387,231	+		CA265_RS05705	0.29	-1.9
1,387,360	+		CA265_RS05705	0.38	+1.3
1,387,475	-		CA265_RS05705	0.45	-1.0
1,387,503	+		CA265_RS05705	0.47	-0.6
1,387,535	-		CA265_RS05705	0.49	+0.7
1,387,774	+		CA265_RS05705	0.64	-1.7
1,387,775	-		CA265_RS05705	0.64	-1.1
1,387,792	+		CA265_RS05705	0.65	-1.3
1,387,812	+		CA265_RS05705	0.66	-1.3
1,388,028	-		CA265_RS05705	0.80	-0.5
1,388,115	+		CA265_RS05705	0.85	-0.3
1,388,128	+		CA265_RS05705	0.86	+1.9
1,388,183	-		CA265_RS05705	0.89	+0.6
1,388,197	+				-0.4
1,388,320	-				+0.3
1,388,376	-				+0.3
1,388,634	-		CA265_RS05710	0.29	+0.7
1,388,634	-		CA265_RS05710	0.29	-0.3
1,388,643	-		CA265_RS05710	0.30	+0.2
1,388,644	+		CA265_RS05710	0.30	-0.2
1,388,645	-		CA265_RS05710	0.30	+0.1
1,388,775	+		CA265_RS05710	0.43	-0.9
1,388,801	-		CA265_RS05710	0.46	+0.5
1,388,836	+		CA265_RS05710	0.49	+0.6
1,388,836	+		CA265_RS05710	0.49	+0.1
1,388,901	+		CA265_RS05710	0.56	-1.2
1,388,921	+		CA265_RS05710	0.58	+0.4
1,388,962	-		CA265_RS05710	0.62	+0.2
1,388,963	+		CA265_RS05710	0.62	-0.7
1,388,963	+		CA265_RS05710	0.62	-0.8
1,388,964	-		CA265_RS05710	0.62	-0.0
1,388,964	-		CA265_RS05710	0.62	-0.3
1,388,980	+		CA265_RS05710	0.64	+1.0
1,389,003	-		CA265_RS05710	0.66	+0.1
1,389,010	+		CA265_RS05710	0.67	-1.0
1,389,010	+		CA265_RS05710	0.67	-0.3
1,389,011	-		CA265_RS05710	0.67	+0.4
1,389,011	-		CA265_RS05710	0.67	-0.4
1,389,038	+		CA265_RS05710	0.69	+1.2
1,389,066	+		CA265_RS05710	0.72	+1.7
1,389,133	-		CA265_RS05710	0.79	+0.3
1,389,182	+		CA265_RS05710	0.84	-0.3
1,389,248	-				-0.5
1,389,257	-				+0.2
1,389,257	-				-0.0
1,389,282	+				-0.8
1,389,299	-				-0.3
1,389,318	+				-0.5