Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05620

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
1,361,725	-				+0.3
1,361,734	+				-0.4
1,361,748	+				+1.0
1,361,827	-				-0.5
1,361,960	+				-0.1
1,361,975	+				+0.6
1,361,982	-				+2.3
1,362,000	+				+0.4
1,362,132	-		CA265_RS05615	0.26	+0.2
1,362,378	+		CA265_RS05615	0.57	-0.3
1,362,378	+		CA265_RS05615	0.57	-0.9
1,362,378	+		CA265_RS05615	0.57	-0.0
1,362,378	+		CA265_RS05615	0.57	+0.2
1,362,379	-		CA265_RS05615	0.57	+1.7
1,362,506	+		CA265_RS05615	0.73	-0.1
1,362,507	-		CA265_RS05615	0.73	+0.1
1,362,618	+		CA265_RS05615	0.88	+1.3
1,362,760	-		CA265_RS05620	0.19	+0.2
1,362,902	+				-0.8
1,362,927	+				-0.0
1,362,956	-				-0.3
1,363,000	+				-0.4
1,363,005	-				-0.8
1,363,007	-				+0.0
1,363,025	-				-0.0
1,363,081	+				-0.9
1,363,082	-				+0.0
1,363,082	-				-0.4
1,363,082	-				-0.6
1,363,120	-				-0.6
1,363,121	+				-0.3
1,363,122	-				-0.8
1,363,154	+				+0.1
1,363,155	-				-1.7
1,363,175	+				-0.1
1,363,206	-				-0.2
1,363,232	-				-0.7
1,363,302	-				+0.1
1,363,316	-		CA265_RS05625	0.10	-1.2
1,363,316	-		CA265_RS05625	0.10	+0.7
1,363,321	-		CA265_RS05625	0.11	-0.5
1,363,337	+		CA265_RS05625	0.12	-0.2
1,363,362	-		CA265_RS05625	0.14	-0.0
1,363,362	-		CA265_RS05625	0.14	+0.1
1,363,399	+		CA265_RS05625	0.16	+0.3
1,363,415	-		CA265_RS05625	0.17	+1.1
1,363,468	+		CA265_RS05625	0.21	+1.1
1,363,521	+		CA265_RS05625	0.25	-0.7
1,363,567	+		CA265_RS05625	0.29	+0.0
1,363,587	+		CA265_RS05625	0.30	-0.7
1,363,595	-		CA265_RS05625	0.31	+0.6
1,363,595	-		CA265_RS05625	0.31	+0.3
1,363,608	-		CA265_RS05625	0.32	-0.3
1,363,634	+		CA265_RS05625	0.33	+0.1
1,363,635	-		CA265_RS05625	0.33	-0.7
1,363,663	+		CA265_RS05625	0.36	-0.9
1,363,678	-		CA265_RS05625	0.37	+0.3
1,363,717	+		CA265_RS05625	0.39	-0.0
1,363,753	+		CA265_RS05625	0.42	-0.3
1,363,753	+		CA265_RS05625	0.42	+0.2
1,363,754	-		CA265_RS05625	0.42	-0.4
1,363,757	-		CA265_RS05625	0.42	+0.1
1,363,757	-		CA265_RS05625	0.42	-0.9
1,363,766	+		CA265_RS05625	0.43	-0.1
1,363,767	-		CA265_RS05625	0.43	+1.2
1,363,767	-		CA265_RS05625	0.43	-0.4
1,363,811	+		CA265_RS05625	0.46	-0.4
1,363,863	-		CA265_RS05625	0.50	+0.2
1,363,863	-		CA265_RS05625	0.50	+0.1
1,363,863	-		CA265_RS05625	0.50	-0.2