Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05330

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
1,278,099	+				+1.4
1,278,219	+		CA265_RS05325	0.24	-0.2
1,278,220	-		CA265_RS05325	0.25	+0.3
1,278,351	-		CA265_RS05325	0.39	-0.1
1,278,382	-		CA265_RS05325	0.43	-0.1
1,278,427	+		CA265_RS05325	0.48	+0.3
1,278,427	+		CA265_RS05325	0.48	+0.3
1,278,430	+		CA265_RS05325	0.48	+0.5
1,278,499	-		CA265_RS05325	0.56	+0.2
1,278,612	+		CA265_RS05325	0.69	+1.0
1,278,694	+		CA265_RS05325	0.78	-0.9
1,278,694	+		CA265_RS05325	0.78	-0.6
1,278,745	-		CA265_RS05325	0.84	+0.2
1,278,748	+				+2.4
1,278,749	-		CA265_RS05325	0.85	-0.6
1,278,809	+				+0.1
1,278,809	+				-0.1
1,278,914	-				+0.0
1,278,915	+				+0.7
1,278,927	-				-0.7
1,278,953	-				-0.9
1,278,995	-				-0.1
1,279,008	+				-0.3
1,279,046	+				-1.4
1,279,047	-				-0.3
1,279,196	+		CA265_RS05330	0.80	+0.9
1,279,205	+		CA265_RS05330	0.85	-0.3
1,279,218	-				+0.2
1,279,246	-				+0.3
1,279,246	-				+0.4
1,279,393	-				-0.2
1,279,681	-		CA265_RS05335	0.11	-0.2
1,279,681	-		CA265_RS05335	0.11	+0.6
1,279,684	-		CA265_RS05335	0.11	-1.6
1,279,730	-		CA265_RS05335	0.14	-0.6
1,279,730	-		CA265_RS05335	0.14	-0.5
1,279,747	+		CA265_RS05335	0.14	+0.4
1,279,747	+		CA265_RS05335	0.14	+0.4
1,279,748	-		CA265_RS05335	0.14	+0.6
1,279,748	-		CA265_RS05335	0.14	-0.4
1,279,809	+		CA265_RS05335	0.17	+1.0
1,279,812	-		CA265_RS05335	0.17	-0.5
1,279,816	-		CA265_RS05335	0.18	+0.7
1,279,817	+		CA265_RS05335	0.18	-1.1
1,279,975	+		CA265_RS05335	0.25	-0.4
1,279,989	+		CA265_RS05335	0.26	-0.8
1,280,110	+		CA265_RS05335	0.31	+0.6
1,280,120	-		CA265_RS05335	0.32	+0.4
1,280,122	+		CA265_RS05335	0.32	-0.1
1,280,122	+		CA265_RS05335	0.32	+0.1
1,280,122	+		CA265_RS05335	0.32	-0.3
1,280,123	-		CA265_RS05335	0.32	-1.1
1,280,181	-		CA265_RS05335	0.34	+1.2