Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05010

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
1,189,105	+		CA265_RS05005	0.26	+0.2
1,189,105	+		CA265_RS05005	0.26	+0.2
1,189,105	+		CA265_RS05005	0.26	+0.1
1,189,106	-		CA265_RS05005	0.27	-1.9
1,189,211	-		CA265_RS05005	0.38	-1.2
1,189,322	-		CA265_RS05005	0.49	+0.3
1,189,332	+		CA265_RS05005	0.51	+0.6
1,189,332	+		CA265_RS05005	0.51	-0.7
1,189,333	-		CA265_RS05005	0.51	+0.2
1,189,353	-		CA265_RS05005	0.53	-0.5
1,189,451	+		CA265_RS05005	0.63	-0.1
1,189,560	-		CA265_RS05005	0.75	-0.6
1,189,560	-		CA265_RS05005	0.75	-0.8
1,189,565	-		CA265_RS05005	0.75	-0.1
1,189,573	+		CA265_RS05005	0.76	-0.2
1,189,593	-		CA265_RS05005	0.78	-0.3
1,189,650	-		CA265_RS05005	0.84	-1.5
1,189,650	-		CA265_RS05005	0.84	-0.2
1,189,650	-		CA265_RS05005	0.84	-0.3
1,189,693	-		CA265_RS05005	0.89	-0.2
1,189,768	-				-0.5
1,189,799	+				+0.1
1,189,849	+				-0.2
1,189,874	+				+0.8
1,190,020	-				-0.1
1,190,032	-				-0.7
1,190,228	-		CA265_RS05010	0.15	-0.4
1,190,233	-		CA265_RS05010	0.15	-0.6
1,190,410	+		CA265_RS05010	0.33	-0.3
1,190,444	-		CA265_RS05010	0.36	+0.2
1,190,460	+		CA265_RS05010	0.38	-0.2
1,190,493	+		CA265_RS05010	0.41	-1.2
1,190,505	+		CA265_RS05010	0.43	-0.9
1,190,529	+		CA265_RS05010	0.45	-1.3
1,190,656	-		CA265_RS05010	0.58	+0.8
1,190,685	+		CA265_RS05010	0.61	+0.0
1,190,730	+		CA265_RS05010	0.65	-0.7
1,190,730	+		CA265_RS05010	0.65	+1.4
1,190,925	+		CA265_RS05010	0.85	+0.8
1,191,060	+				-0.4
1,191,308	+		CA265_RS05015	0.39	-0.2
1,191,331	+		CA265_RS05015	0.42	+0.6
1,191,389	+		CA265_RS05015	0.52	-0.4
1,191,520	-		CA265_RS05015	0.72	+0.8
1,191,666	+				-0.5
1,191,694	+				-0.1
1,191,702	+				-0.8