Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04655

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
1,112,151	+		CA265_RS04650	0.27	-0.4
1,112,155	+		CA265_RS04650	0.27	-0.6
1,112,323	+		CA265_RS04650	0.40	-0.7
1,112,350	+		CA265_RS04650	0.42	-0.9
1,112,350	+		CA265_RS04650	0.42	-1.0
1,112,351	-		CA265_RS04650	0.42	-1.4
1,112,351	-		CA265_RS04650	0.42	-1.0
1,112,369	+		CA265_RS04650	0.43	-1.4
1,112,481	-		CA265_RS04650	0.51	-0.4
1,112,521	+		CA265_RS04650	0.54	-1.0
1,112,522	-		CA265_RS04650	0.54	-2.5
1,112,689	+		CA265_RS04650	0.67	-0.5
1,112,736	-		CA265_RS04650	0.70	-0.9
1,112,764	-		CA265_RS04650	0.72	+0.1
1,112,775	-		CA265_RS04650	0.73	-1.1
1,112,833	+		CA265_RS04650	0.77	-0.9
1,112,932	+		CA265_RS04650	0.85	-1.0
1,113,005	-				-1.2
1,113,060	+				+0.1
1,113,068	-				-1.8
1,113,068	-				+0.5
1,113,068	-				+2.1
1,113,113	+				-0.9
1,113,120	-				-1.5
1,113,120	-				-0.5
1,113,131	+				-1.3
1,113,132	-				-3.3
1,113,152	+				-0.8
1,113,153	-				+1.0
1,113,160	-				-0.6
1,113,227	+		CA265_RS04655	0.13	-0.7
1,113,228	-		CA265_RS04655	0.13	-1.5
1,113,228	-		CA265_RS04655	0.13	-0.9
1,113,239	-		CA265_RS04655	0.15	-1.5
1,113,239	-		CA265_RS04655	0.15	-0.2
1,113,354	+		CA265_RS04655	0.32	-1.7
1,113,454	-		CA265_RS04655	0.46	-0.6
1,113,555	+		CA265_RS04655	0.61	-0.4
1,113,556	-		CA265_RS04655	0.62	-0.6
1,113,724	+		CA265_RS04655	0.86	-0.4
1,113,729	+		CA265_RS04655	0.87	-1.2
1,113,812	-				-0.8
1,113,812	-				-1.1
1,113,876	-				-0.4
1,113,876	-				-0.4
1,113,889	-				+0.1
1,113,890	+				-0.7
1,113,968	-				-0.2
1,113,968	-				-0.9
1,114,121	+		CA265_RS04660	0.14	-1.1
1,114,126	-		CA265_RS04660	0.14	-0.0
1,114,172	+		CA265_RS04660	0.22	+1.2
1,114,173	-		CA265_RS04660	0.22	+0.0
1,114,174	+		CA265_RS04660	0.22	+0.4
1,114,178	+		CA265_RS04660	0.23	-0.8
1,114,179	-		CA265_RS04660	0.23	-0.2
1,114,179	-		CA265_RS04660	0.23	-0.2
1,114,229	+		CA265_RS04660	0.31	-0.2
1,114,330	-		CA265_RS04660	0.47	-0.5
1,114,402	+		CA265_RS04660	0.58	-0.0
1,114,402	+		CA265_RS04660	0.58	+0.2
1,114,403	-		CA265_RS04660	0.58	+0.2
1,114,421	+		CA265_RS04660	0.61	+0.5
1,114,458	-		CA265_RS04660	0.67	-0.6
1,114,521	-		CA265_RS04660	0.77	-0.2
1,114,560	-		CA265_RS04660	0.83	+0.4
1,114,562	+		CA265_RS04660	0.84	+0.3
1,114,562	+		CA265_RS04660	0.84	+1.0
1,114,582	+		CA265_RS04660	0.87	-0.4
1,114,583	-		CA265_RS04660	0.87	+0.0
1,114,583	-		CA265_RS04660	0.87	+0.3
1,114,616	+				-0.1
1,114,617	-				+0.2
1,114,617	-				-0.9
1,114,638	+				-1.4
1,114,638	+				+0.0
1,114,639	-				+0.4
1,114,662	+				-0.1
1,114,668	-				-0.2
1,114,668	-				+0.8
1,114,671	+				-0.4
1,114,681	-				+0.3
1,114,758	-				+0.1
1,114,768	+				-0.2