Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04385

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
1,053,033	-				+0.8
1,053,068	-				-0.5
1,053,068	-				+0.2
1,053,068	-				+0.2
1,053,099	-				-0.2
1,053,277	-		CA265_RS04385	0.29	-0.6
1,053,277	-		CA265_RS04385	0.29	-0.2
1,053,288	-		CA265_RS04385	0.31	-1.5
1,053,446	+		CA265_RS04385	0.54	+0.2
1,053,525	+		CA265_RS04385	0.66	-0.9
1,053,526	-		CA265_RS04385	0.66	-0.8
1,053,526	-		CA265_RS04385	0.66	-0.2
1,053,648	-		CA265_RS04385	0.83	+0.2
1,053,648	-		CA265_RS04385	0.83	-0.4
1,053,681	-		CA265_RS04385	0.88	-1.0
1,053,741	-				+0.0
1,053,744	-				-0.2
1,053,744	-				-1.2
1,053,744	-				-0.9
1,053,747	-				-0.6
1,053,747	-				-0.2
1,053,749	-				-1.3
1,053,774	+				-0.4
1,053,825	-				-1.1
1,053,869	-				-0.9
1,053,871	-				+0.7
1,053,905	+				-1.1
1,053,911	+				-0.8
1,053,911	+				+0.1
1,053,912	-				-0.3
1,053,925	+				-0.4
1,053,965	+				+0.3
1,054,069	-				-1.8
1,054,122	-				-0.1
1,054,132	+				+0.5
1,054,132	+				-0.3
1,054,133	-				-1.4
1,054,137	+				+0.7
1,054,201	+				+0.6
1,054,202	-				-0.9
1,054,269	-				+0.0
1,054,334	-		CA265_RS04390	0.11	+0.4
1,054,399	-		CA265_RS04390	0.24	-1.1
1,054,415	+		CA265_RS04390	0.28	-0.5
1,054,415	+		CA265_RS04390	0.28	+0.1
1,054,559	-		CA265_RS04390	0.57	-0.2
1,054,617	-		CA265_RS04390	0.68	+0.0
1,054,617	-		CA265_RS04390	0.68	-0.7
1,054,761	-				-2.2