Experiment: Sisomicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3814 and Ac3H11_3815 are separated by 109 nucleotides Ac3H11_3815 and Ac3H11_3816 are separated by 118 nucleotides
Ac3H11_3814 - Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like, at 29,129 to 30,220
_3814
Ac3H11_3815 - putative membrane protein, at 30,330 to 30,911
_3815
Ac3H11_3816 - Patatin, at 31,030 to 32,322
_3816
Position (kb) 30
31 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 30.227 kb on - strand at 30.227 kb on - strand at 30.245 kb on - strand at 30.249 kb on + strand at 30.250 kb on - strand at 30.250 kb on - strand at 30.250 kb on - strand at 30.450 kb on + strand, within Ac3H11_3815 at 30.451 kb on - strand, within Ac3H11_3815 at 30.451 kb on - strand, within Ac3H11_3815 at 30.451 kb on - strand, within Ac3H11_3815 at 30.451 kb on - strand, within Ac3H11_3815 at 30.628 kb on - strand, within Ac3H11_3815 at 30.628 kb on - strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.801 kb on + strand, within Ac3H11_3815 at 30.802 kb on - strand, within Ac3H11_3815 at 30.802 kb on - strand, within Ac3H11_3815 at 30.802 kb on - strand, within Ac3H11_3815 at 30.802 kb on - strand, within Ac3H11_3815 at 30.802 kb on - strand, within Ac3H11_3815 at 30.802 kb on - strand, within Ac3H11_3815 at 30.802 kb on - strand, within Ac3H11_3815 at 30.802 kb on - strand, within Ac3H11_3815 at 30.802 kb on - strand, within Ac3H11_3815 at 30.802 kb on - strand, within Ac3H11_3815 at 30.843 kb on + strand, within Ac3H11_3815 at 30.843 kb on + strand, within Ac3H11_3815 at 30.844 kb on - strand, within Ac3H11_3815 at 30.844 kb on - strand, within Ac3H11_3815 at 30.844 kb on - strand, within Ac3H11_3815 at 30.844 kb on - strand, within Ac3H11_3815 at 30.844 kb on - strand, within Ac3H11_3815 at 30.844 kb on - strand, within Ac3H11_3815 at 30.844 kb on - strand, within Ac3H11_3815 at 31.212 kb on + strand, within Ac3H11_3816 at 31.212 kb on + strand, within Ac3H11_3816 at 31.213 kb on - strand, within Ac3H11_3816 at 31.213 kb on - strand, within Ac3H11_3816 at 31.330 kb on + strand, within Ac3H11_3816 at 31.331 kb on - strand, within Ac3H11_3816 at 31.331 kb on - strand, within Ac3H11_3816 at 31.549 kb on + strand, within Ac3H11_3816 at 31.550 kb on - strand, within Ac3H11_3816 at 31.550 kb on - strand, within Ac3H11_3816 at 31.550 kb on - strand, within Ac3H11_3816 at 31.861 kb on + strand, within Ac3H11_3816 at 31.861 kb on + strand, within Ac3H11_3816
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.001 mg/ml remove 30,227 - -1.4 30,227 - -0.2 30,245 - -1.7 30,249 + +1.6 30,250 - -0.6 30,250 - +0.6 30,250 - -2.7 30,450 + Ac3H11_3815 0.21 -0.0 30,451 - Ac3H11_3815 0.21 -0.6 30,451 - Ac3H11_3815 0.21 +0.0 30,451 - Ac3H11_3815 0.21 +0.9 30,451 - Ac3H11_3815 0.21 -0.7 30,628 - Ac3H11_3815 0.51 -0.9 30,628 - Ac3H11_3815 0.51 -0.3 30,801 + Ac3H11_3815 0.81 +2.0 30,801 + Ac3H11_3815 0.81 -0.9 30,801 + Ac3H11_3815 0.81 -0.7 30,801 + Ac3H11_3815 0.81 -0.0 30,801 + Ac3H11_3815 0.81 -0.4 30,801 + Ac3H11_3815 0.81 +1.4 30,801 + Ac3H11_3815 0.81 -0.2 30,801 + Ac3H11_3815 0.81 -2.0 30,801 + Ac3H11_3815 0.81 -0.6 30,801 + Ac3H11_3815 0.81 +0.4 30,801 + Ac3H11_3815 0.81 -1.9 30,802 - Ac3H11_3815 0.81 -0.2 30,802 - Ac3H11_3815 0.81 -1.1 30,802 - Ac3H11_3815 0.81 +1.8 30,802 - Ac3H11_3815 0.81 -0.2 30,802 - Ac3H11_3815 0.81 -1.1 30,802 - Ac3H11_3815 0.81 -2.2 30,802 - Ac3H11_3815 0.81 +0.2 30,802 - Ac3H11_3815 0.81 +0.1 30,802 - Ac3H11_3815 0.81 -0.6 30,802 - Ac3H11_3815 0.81 -0.7 30,843 + Ac3H11_3815 0.88 -0.2 30,843 + Ac3H11_3815 0.88 -0.6 30,844 - Ac3H11_3815 0.88 -1.8 30,844 - Ac3H11_3815 0.88 -2.6 30,844 - Ac3H11_3815 0.88 +0.2 30,844 - Ac3H11_3815 0.88 -1.3 30,844 - Ac3H11_3815 0.88 -1.4 30,844 - Ac3H11_3815 0.88 +0.6 30,844 - Ac3H11_3815 0.88 -0.3 31,212 + Ac3H11_3816 0.14 +1.1 31,212 + Ac3H11_3816 0.14 -1.1 31,213 - Ac3H11_3816 0.14 -0.1 31,213 - Ac3H11_3816 0.14 -1.8 31,330 + Ac3H11_3816 0.23 -0.2 31,331 - Ac3H11_3816 0.23 -0.8 31,331 - Ac3H11_3816 0.23 -4.2 31,549 + Ac3H11_3816 0.40 -1.4 31,550 - Ac3H11_3816 0.40 -0.5 31,550 - Ac3H11_3816 0.40 +0.6 31,550 - Ac3H11_3816 0.40 -2.7 31,861 + Ac3H11_3816 0.64 +0.5 31,861 + Ac3H11_3816 0.64 +1.3
Or see this region's nucleotide sequence