Experiment: Sisomicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3602 and Ac3H11_3603 are separated by 42 nucleotides Ac3H11_3603 and Ac3H11_3604 are separated by 68 nucleotides Ac3H11_3604 and Ac3H11_3605 are separated by 348 nucleotides Ac3H11_3605 and Ac3H11_3606 are separated by 152 nucleotides
Ac3H11_3602 - Response regulator, at 154,852 to 155,631
_3602
Ac3H11_3603 - Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91), at 155,674 to 156,474
_3603
Ac3H11_3604 - Probable sensor histidine kinase protein (EC 2.7.3.-), at 156,543 to 159,020
_3604
Ac3H11_3605 - FIG00349159: hypothetical protein, at 159,369 to 159,539
_3605
Ac3H11_3606 - Mlr1171 protein, at 159,692 to 160,294
_3606
Position (kb) 156
157
158
159
160 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 155.629 kb on + strand at 155.646 kb on + strand at 155.646 kb on + strand at 155.647 kb on - strand at 155.647 kb on - strand at 155.647 kb on - strand at 155.647 kb on - strand at 155.721 kb on + strand at 155.721 kb on + strand at 155.721 kb on + strand at 155.721 kb on + strand at 155.722 kb on - strand at 155.722 kb on - strand at 155.722 kb on - strand at 155.729 kb on + strand at 155.729 kb on + strand at 155.730 kb on - strand at 155.812 kb on + strand, within Ac3H11_3603 at 155.812 kb on + strand, within Ac3H11_3603 at 155.813 kb on - strand, within Ac3H11_3603 at 155.813 kb on - strand, within Ac3H11_3603 at 155.815 kb on + strand, within Ac3H11_3603 at 155.815 kb on + strand, within Ac3H11_3603 at 155.816 kb on - strand, within Ac3H11_3603 at 155.816 kb on - strand, within Ac3H11_3603 at 155.816 kb on - strand, within Ac3H11_3603 at 155.816 kb on - strand, within Ac3H11_3603 at 155.828 kb on - strand, within Ac3H11_3603 at 155.828 kb on - strand, within Ac3H11_3603 at 155.828 kb on - strand, within Ac3H11_3603 at 155.914 kb on + strand, within Ac3H11_3603 at 155.918 kb on + strand, within Ac3H11_3603 at 155.918 kb on + strand, within Ac3H11_3603 at 155.918 kb on + strand, within Ac3H11_3603 at 155.918 kb on + strand, within Ac3H11_3603 at 155.918 kb on + strand, within Ac3H11_3603 at 155.919 kb on - strand, within Ac3H11_3603 at 155.919 kb on - strand, within Ac3H11_3603 at 155.919 kb on - strand, within Ac3H11_3603 at 155.919 kb on - strand, within Ac3H11_3603 at 155.919 kb on - strand, within Ac3H11_3603 at 155.919 kb on - strand, within Ac3H11_3603 at 156.034 kb on + strand, within Ac3H11_3603 at 156.034 kb on + strand, within Ac3H11_3603 at 156.035 kb on - strand, within Ac3H11_3603 at 156.035 kb on - strand, within Ac3H11_3603 at 156.035 kb on - strand, within Ac3H11_3603 at 156.052 kb on + strand, within Ac3H11_3603 at 156.052 kb on + strand, within Ac3H11_3603 at 156.052 kb on + strand, within Ac3H11_3603 at 156.052 kb on + strand, within Ac3H11_3603 at 156.052 kb on + strand, within Ac3H11_3603 at 156.053 kb on - strand, within Ac3H11_3603 at 156.053 kb on - strand, within Ac3H11_3603 at 156.053 kb on - strand, within Ac3H11_3603 at 156.053 kb on - strand, within Ac3H11_3603 at 156.053 kb on - strand, within Ac3H11_3603 at 156.053 kb on - strand, within Ac3H11_3603 at 156.053 kb on - strand, within Ac3H11_3603 at 156.053 kb on - strand, within Ac3H11_3603 at 156.053 kb on - strand, within Ac3H11_3603 at 156.259 kb on + strand, within Ac3H11_3603 at 156.260 kb on - strand, within Ac3H11_3603 at 156.265 kb on + strand, within Ac3H11_3603 at 156.341 kb on - strand, within Ac3H11_3603 at 156.347 kb on - strand, within Ac3H11_3603 at 156.407 kb on + strand at 156.408 kb on - strand at 156.429 kb on - strand at 156.539 kb on + strand at 156.539 kb on + strand at 156.539 kb on + strand at 156.539 kb on + strand at 156.539 kb on + strand at 156.539 kb on + strand at 156.539 kb on + strand at 156.540 kb on - strand at 156.540 kb on - strand at 156.540 kb on - strand at 156.860 kb on + strand, within Ac3H11_3604 at 156.861 kb on - strand, within Ac3H11_3604 at 156.946 kb on + strand, within Ac3H11_3604 at 156.946 kb on + strand, within Ac3H11_3604 at 157.022 kb on - strand, within Ac3H11_3604 at 157.033 kb on - strand, within Ac3H11_3604 at 157.033 kb on - strand, within Ac3H11_3604 at 157.033 kb on - strand, within Ac3H11_3604 at 157.033 kb on - strand, within Ac3H11_3604 at 157.033 kb on - strand, within Ac3H11_3604 at 157.033 kb on - strand, within Ac3H11_3604 at 157.038 kb on + strand, within Ac3H11_3604 at 157.038 kb on + strand, within Ac3H11_3604 at 157.038 kb on + strand, within Ac3H11_3604 at 157.038 kb on + strand, within Ac3H11_3604 at 157.039 kb on - strand, within Ac3H11_3604 at 157.039 kb on - strand, within Ac3H11_3604 at 157.039 kb on - strand, within Ac3H11_3604 at 157.039 kb on - strand, within Ac3H11_3604 at 157.155 kb on + strand, within Ac3H11_3604 at 157.168 kb on + strand, within Ac3H11_3604 at 157.168 kb on + strand, within Ac3H11_3604 at 157.168 kb on + strand, within Ac3H11_3604 at 157.168 kb on + strand, within Ac3H11_3604 at 157.169 kb on - strand, within Ac3H11_3604 at 157.169 kb on - strand, within Ac3H11_3604 at 157.169 kb on - strand, within Ac3H11_3604 at 157.242 kb on + strand, within Ac3H11_3604 at 157.269 kb on + strand, within Ac3H11_3604 at 157.269 kb on + strand, within Ac3H11_3604 at 157.269 kb on + strand, within Ac3H11_3604 at 157.269 kb on + strand, within Ac3H11_3604 at 157.270 kb on - strand, within Ac3H11_3604 at 157.270 kb on - strand, within Ac3H11_3604 at 157.270 kb on - strand, within Ac3H11_3604 at 157.272 kb on - strand, within Ac3H11_3604 at 157.417 kb on + strand, within Ac3H11_3604 at 157.418 kb on - strand, within Ac3H11_3604 at 157.605 kb on + strand, within Ac3H11_3604 at 157.605 kb on + strand, within Ac3H11_3604 at 157.605 kb on + strand, within Ac3H11_3604 at 157.605 kb on + strand, within Ac3H11_3604 at 157.605 kb on + strand, within Ac3H11_3604 at 157.605 kb on + strand, within Ac3H11_3604 at 157.605 kb on + strand, within Ac3H11_3604 at 157.606 kb on - strand, within Ac3H11_3604 at 157.606 kb on - strand, within Ac3H11_3604 at 157.606 kb on - strand, within Ac3H11_3604 at 157.606 kb on - strand, within Ac3H11_3604 at 157.606 kb on - strand, within Ac3H11_3604 at 157.606 kb on - strand, within Ac3H11_3604 at 157.631 kb on + strand, within Ac3H11_3604 at 157.632 kb on - strand, within Ac3H11_3604 at 157.632 kb on - strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.745 kb on + strand, within Ac3H11_3604 at 157.746 kb on - strand, within Ac3H11_3604 at 157.746 kb on - strand, within Ac3H11_3604 at 157.746 kb on - strand, within Ac3H11_3604 at 157.746 kb on - strand, within Ac3H11_3604 at 157.746 kb on - strand, within Ac3H11_3604 at 157.769 kb on - strand, within Ac3H11_3604 at 157.769 kb on - strand, within Ac3H11_3604 at 158.001 kb on + strand, within Ac3H11_3604 at 158.002 kb on - strand, within Ac3H11_3604 at 158.002 kb on - strand, within Ac3H11_3604 at 158.002 kb on - strand, within Ac3H11_3604 at 158.417 kb on - strand, within Ac3H11_3604 at 158.417 kb on - strand, within Ac3H11_3604 at 158.922 kb on + strand at 158.922 kb on + strand at 158.922 kb on + strand at 158.923 kb on - strand at 158.923 kb on - strand at 158.923 kb on - strand at 158.923 kb on - strand at 158.923 kb on - strand at 158.923 kb on - strand at 159.018 kb on + strand at 159.134 kb on + strand at 159.177 kb on + strand at 159.178 kb on - strand at 159.279 kb on + strand at 159.279 kb on + strand at 159.279 kb on + strand at 159.279 kb on + strand at 159.279 kb on + strand at 159.472 kb on + strand, within Ac3H11_3605 at 159.488 kb on + strand, within Ac3H11_3605 at 159.542 kb on + strand at 159.542 kb on + strand at 159.542 kb on + strand at 159.542 kb on + strand at 159.542 kb on + strand at 159.542 kb on + strand at 159.542 kb on + strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.543 kb on - strand at 159.576 kb on + strand at 159.995 kb on + strand, within Ac3H11_3606 at 159.995 kb on + strand, within Ac3H11_3606 at 159.996 kb on - strand, within Ac3H11_3606
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.001 mg/ml remove 155,629 + +1.1 155,646 + +0.2 155,646 + -2.0 155,647 - -2.1 155,647 - -0.0 155,647 - +0.2 155,647 - +0.6 155,721 + +0.8 155,721 + +1.1 155,721 + +0.1 155,721 + +0.8 155,722 - +1.5 155,722 - +1.1 155,722 - -0.8 155,729 + -0.3 155,729 + +1.4 155,730 - -0.1 155,812 + Ac3H11_3603 0.17 +0.6 155,812 + Ac3H11_3603 0.17 +1.6 155,813 - Ac3H11_3603 0.17 +0.6 155,813 - Ac3H11_3603 0.17 -2.1 155,815 + Ac3H11_3603 0.18 -0.3 155,815 + Ac3H11_3603 0.18 +1.1 155,816 - Ac3H11_3603 0.18 -1.0 155,816 - Ac3H11_3603 0.18 -0.9 155,816 - Ac3H11_3603 0.18 +0.9 155,816 - Ac3H11_3603 0.18 -1.4 155,828 - Ac3H11_3603 0.19 -0.3 155,828 - Ac3H11_3603 0.19 +0.1 155,828 - Ac3H11_3603 0.19 -1.5 155,914 + Ac3H11_3603 0.30 -0.3 155,918 + Ac3H11_3603 0.30 -0.7 155,918 + Ac3H11_3603 0.30 -0.4 155,918 + Ac3H11_3603 0.30 +0.5 155,918 + Ac3H11_3603 0.30 +0.9 155,918 + Ac3H11_3603 0.30 +0.2 155,919 - Ac3H11_3603 0.31 -1.3 155,919 - Ac3H11_3603 0.31 +0.4 155,919 - Ac3H11_3603 0.31 +0.5 155,919 - Ac3H11_3603 0.31 +0.9 155,919 - Ac3H11_3603 0.31 -1.4 155,919 - Ac3H11_3603 0.31 -0.1 156,034 + Ac3H11_3603 0.45 +1.6 156,034 + Ac3H11_3603 0.45 -0.1 156,035 - Ac3H11_3603 0.45 -1.4 156,035 - Ac3H11_3603 0.45 +1.1 156,035 - Ac3H11_3603 0.45 +1.0 156,052 + Ac3H11_3603 0.47 +0.5 156,052 + Ac3H11_3603 0.47 -1.3 156,052 + Ac3H11_3603 0.47 +0.5 156,052 + Ac3H11_3603 0.47 +0.5 156,052 + Ac3H11_3603 0.47 -0.8 156,053 - Ac3H11_3603 0.47 -0.0 156,053 - Ac3H11_3603 0.47 -1.1 156,053 - Ac3H11_3603 0.47 +0.8 156,053 - Ac3H11_3603 0.47 -1.5 156,053 - Ac3H11_3603 0.47 +0.7 156,053 - Ac3H11_3603 0.47 +0.3 156,053 - Ac3H11_3603 0.47 -2.9 156,053 - Ac3H11_3603 0.47 +0.2 156,053 - Ac3H11_3603 0.47 +1.1 156,259 + Ac3H11_3603 0.73 -2.9 156,260 - Ac3H11_3603 0.73 +2.3 156,265 + Ac3H11_3603 0.74 +2.8 156,341 - Ac3H11_3603 0.83 -0.4 156,347 - Ac3H11_3603 0.84 +0.4 156,407 + -0.5 156,408 - +0.3 156,429 - +0.1 156,539 + -0.2 156,539 + +0.6 156,539 + +1.5 156,539 + +0.1 156,539 + +1.1 156,539 + +1.6 156,539 + -3.0 156,540 - -0.9 156,540 - -0.3 156,540 - +0.7 156,860 + Ac3H11_3604 0.13 +0.3 156,861 - Ac3H11_3604 0.13 -1.3 156,946 + Ac3H11_3604 0.16 +1.2 156,946 + Ac3H11_3604 0.16 -2.3 157,022 - Ac3H11_3604 0.19 +0.3 157,033 - Ac3H11_3604 0.20 +0.3 157,033 - Ac3H11_3604 0.20 -0.4 157,033 - Ac3H11_3604 0.20 +1.2 157,033 - Ac3H11_3604 0.20 -0.3 157,033 - Ac3H11_3604 0.20 +1.5 157,033 - Ac3H11_3604 0.20 +0.8 157,038 + Ac3H11_3604 0.20 +1.9 157,038 + Ac3H11_3604 0.20 +0.9 157,038 + Ac3H11_3604 0.20 -0.5 157,038 + Ac3H11_3604 0.20 +0.2 157,039 - Ac3H11_3604 0.20 -3.0 157,039 - Ac3H11_3604 0.20 +0.5 157,039 - Ac3H11_3604 0.20 +1.5 157,039 - Ac3H11_3604 0.20 -1.9 157,155 + Ac3H11_3604 0.25 +1.2 157,168 + Ac3H11_3604 0.25 -0.4 157,168 + Ac3H11_3604 0.25 -2.1 157,168 + Ac3H11_3604 0.25 -0.9 157,168 + Ac3H11_3604 0.25 -1.8 157,169 - Ac3H11_3604 0.25 +0.6 157,169 - Ac3H11_3604 0.25 -1.3 157,169 - Ac3H11_3604 0.25 +0.8 157,242 + Ac3H11_3604 0.28 -0.9 157,269 + Ac3H11_3604 0.29 -0.4 157,269 + Ac3H11_3604 0.29 +0.2 157,269 + Ac3H11_3604 0.29 +0.3 157,269 + Ac3H11_3604 0.29 +0.3 157,270 - Ac3H11_3604 0.29 +0.2 157,270 - Ac3H11_3604 0.29 +0.9 157,270 - Ac3H11_3604 0.29 -1.8 157,272 - Ac3H11_3604 0.29 +0.8 157,417 + Ac3H11_3604 0.35 +0.5 157,418 - Ac3H11_3604 0.35 +0.5 157,605 + Ac3H11_3604 0.43 -1.0 157,605 + Ac3H11_3604 0.43 -1.5 157,605 + Ac3H11_3604 0.43 -0.7 157,605 + Ac3H11_3604 0.43 +0.7 157,605 + Ac3H11_3604 0.43 +0.9 157,605 + Ac3H11_3604 0.43 +0.4 157,605 + Ac3H11_3604 0.43 +0.6 157,606 - Ac3H11_3604 0.43 +0.6 157,606 - Ac3H11_3604 0.43 -0.9 157,606 - Ac3H11_3604 0.43 -2.7 157,606 - Ac3H11_3604 0.43 +1.5 157,606 - Ac3H11_3604 0.43 -0.4 157,606 - Ac3H11_3604 0.43 +0.4 157,631 + Ac3H11_3604 0.44 -0.7 157,632 - Ac3H11_3604 0.44 +1.6 157,632 - Ac3H11_3604 0.44 +0.9 157,745 + Ac3H11_3604 0.49 +1.1 157,745 + Ac3H11_3604 0.49 +0.1 157,745 + Ac3H11_3604 0.49 -2.8 157,745 + Ac3H11_3604 0.49 +0.0 157,745 + Ac3H11_3604 0.49 +0.5 157,745 + Ac3H11_3604 0.49 -1.4 157,745 + Ac3H11_3604 0.49 -0.0 157,745 + Ac3H11_3604 0.49 -0.7 157,745 + Ac3H11_3604 0.49 +3.1 157,745 + Ac3H11_3604 0.49 +0.5 157,745 + Ac3H11_3604 0.49 -2.3 157,745 + Ac3H11_3604 0.49 +0.6 157,745 + Ac3H11_3604 0.49 +0.7 157,745 + Ac3H11_3604 0.49 -0.0 157,745 + Ac3H11_3604 0.49 -2.2 157,746 - Ac3H11_3604 0.49 -0.5 157,746 - Ac3H11_3604 0.49 +0.8 157,746 - Ac3H11_3604 0.49 +1.3 157,746 - Ac3H11_3604 0.49 -0.4 157,746 - Ac3H11_3604 0.49 +0.4 157,769 - Ac3H11_3604 0.49 -0.9 157,769 - Ac3H11_3604 0.49 -1.0 158,001 + Ac3H11_3604 0.59 -2.1 158,002 - Ac3H11_3604 0.59 +0.4 158,002 - Ac3H11_3604 0.59 -1.1 158,002 - Ac3H11_3604 0.59 +0.4 158,417 - Ac3H11_3604 0.76 +0.3 158,417 - Ac3H11_3604 0.76 +0.6 158,922 + -0.0 158,922 + +1.6 158,922 + -2.4 158,923 - -1.7 158,923 - -2.2 158,923 - -1.7 158,923 - +0.9 158,923 - +0.9 158,923 - -1.3 159,018 + -2.2 159,134 + +0.4 159,177 + +1.1 159,178 - +0.6 159,279 + -1.9 159,279 + -2.2 159,279 + -1.2 159,279 + +1.4 159,279 + +0.5 159,472 + Ac3H11_3605 0.60 +0.8 159,488 + Ac3H11_3605 0.70 +0.8 159,542 + -2.0 159,542 + -0.3 159,542 + +1.1 159,542 + +0.0 159,542 + +1.7 159,542 + -0.7 159,542 + +0.2 159,543 - -2.1 159,543 - +0.2 159,543 - -0.9 159,543 - +0.9 159,543 - -0.3 159,543 - +1.1 159,543 - +0.9 159,543 - +0.2 159,543 - +2.5 159,576 + +1.0 159,995 + Ac3H11_3606 0.50 -1.5 159,995 + Ac3H11_3606 0.50 +0.1 159,996 - Ac3H11_3606 0.50 -2.5
Or see this region's nucleotide sequence