Experiment: Sisomicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3283 and Ac3H11_3284 overlap by 4 nucleotides Ac3H11_3284 and Ac3H11_3285 are separated by 112 nucleotides
Ac3H11_3283 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 15,328 to 16,983
_3283
Ac3H11_3284 - Sugar transporter, at 16,980 to 18,344
_3284
Ac3H11_3285 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 18,457 to 19,545
_3285
Position (kb) 16
17
18
19 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 16.174 kb on + strand, within Ac3H11_3283 at 16.181 kb on + strand, within Ac3H11_3283 at 16.181 kb on + strand, within Ac3H11_3283 at 16.181 kb on + strand, within Ac3H11_3283 at 16.181 kb on + strand, within Ac3H11_3283 at 16.182 kb on - strand, within Ac3H11_3283 at 16.182 kb on - strand, within Ac3H11_3283 at 16.204 kb on + strand, within Ac3H11_3283 at 16.204 kb on + strand, within Ac3H11_3283 at 16.205 kb on - strand, within Ac3H11_3283 at 16.280 kb on - strand, within Ac3H11_3283 at 16.280 kb on - strand, within Ac3H11_3283 at 16.280 kb on - strand, within Ac3H11_3283 at 16.562 kb on - strand, within Ac3H11_3283 at 16.562 kb on - strand, within Ac3H11_3283 at 16.580 kb on - strand, within Ac3H11_3283 at 17.091 kb on + strand at 17.229 kb on + strand, within Ac3H11_3284 at 17.229 kb on + strand, within Ac3H11_3284 at 17.229 kb on + strand, within Ac3H11_3284 at 17.230 kb on - strand, within Ac3H11_3284 at 17.230 kb on - strand, within Ac3H11_3284 at 17.230 kb on - strand, within Ac3H11_3284 at 17.230 kb on - strand, within Ac3H11_3284 at 17.238 kb on + strand, within Ac3H11_3284 at 17.239 kb on - strand, within Ac3H11_3284 at 17.239 kb on - strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.334 kb on + strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.335 kb on - strand, within Ac3H11_3284 at 17.376 kb on + strand, within Ac3H11_3284 at 17.376 kb on + strand, within Ac3H11_3284 at 17.377 kb on - strand, within Ac3H11_3284 at 17.409 kb on + strand, within Ac3H11_3284 at 17.526 kb on + strand, within Ac3H11_3284 at 17.527 kb on - strand, within Ac3H11_3284 at 17.527 kb on - strand, within Ac3H11_3284 at 17.766 kb on + strand, within Ac3H11_3284 at 17.766 kb on + strand, within Ac3H11_3284 at 17.766 kb on + strand, within Ac3H11_3284 at 17.766 kb on + strand, within Ac3H11_3284 at 17.766 kb on + strand, within Ac3H11_3284 at 17.767 kb on - strand, within Ac3H11_3284 at 17.767 kb on - strand, within Ac3H11_3284 at 17.767 kb on - strand, within Ac3H11_3284 at 17.767 kb on - strand, within Ac3H11_3284 at 17.778 kb on + strand, within Ac3H11_3284 at 17.778 kb on + strand, within Ac3H11_3284 at 17.778 kb on + strand, within Ac3H11_3284 at 17.779 kb on - strand, within Ac3H11_3284 at 17.779 kb on - strand, within Ac3H11_3284 at 17.779 kb on - strand, within Ac3H11_3284 at 17.857 kb on + strand, within Ac3H11_3284 at 17.857 kb on + strand, within Ac3H11_3284 at 17.857 kb on + strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.858 kb on - strand, within Ac3H11_3284 at 17.898 kb on + strand, within Ac3H11_3284 at 17.898 kb on + strand, within Ac3H11_3284 at 17.898 kb on + strand, within Ac3H11_3284 at 17.899 kb on - strand, within Ac3H11_3284 at 17.943 kb on + strand, within Ac3H11_3284 at 17.943 kb on + strand, within Ac3H11_3284 at 17.944 kb on - strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.096 kb on + strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.097 kb on - strand, within Ac3H11_3284 at 18.099 kb on + strand, within Ac3H11_3284 at 18.100 kb on - strand, within Ac3H11_3284 at 18.180 kb on + strand, within Ac3H11_3284 at 18.180 kb on + strand, within Ac3H11_3284 at 18.180 kb on + strand, within Ac3H11_3284 at 18.180 kb on + strand, within Ac3H11_3284 at 18.181 kb on - strand, within Ac3H11_3284 at 18.181 kb on - strand, within Ac3H11_3284 at 18.181 kb on - strand, within Ac3H11_3284 at 18.288 kb on + strand at 18.410 kb on - strand at 18.410 kb on - strand at 18.410 kb on - strand at 18.410 kb on - strand at 18.664 kb on + strand, within Ac3H11_3285 at 18.664 kb on + strand, within Ac3H11_3285 at 18.665 kb on - strand, within Ac3H11_3285 at 18.665 kb on - strand, within Ac3H11_3285 at 18.665 kb on - strand, within Ac3H11_3285 at 18.736 kb on + strand, within Ac3H11_3285 at 18.737 kb on - strand, within Ac3H11_3285 at 18.737 kb on - strand, within Ac3H11_3285 at 18.835 kb on + strand, within Ac3H11_3285 at 18.835 kb on + strand, within Ac3H11_3285 at 18.836 kb on - strand, within Ac3H11_3285 at 18.836 kb on - strand, within Ac3H11_3285
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.001 mg/ml remove 16,174 + Ac3H11_3283 0.51 -0.1 16,181 + Ac3H11_3283 0.52 +0.4 16,181 + Ac3H11_3283 0.52 +1.0 16,181 + Ac3H11_3283 0.52 +2.2 16,181 + Ac3H11_3283 0.52 -1.3 16,182 - Ac3H11_3283 0.52 -0.5 16,182 - Ac3H11_3283 0.52 -1.3 16,204 + Ac3H11_3283 0.53 +0.8 16,204 + Ac3H11_3283 0.53 +1.5 16,205 - Ac3H11_3283 0.53 +0.8 16,280 - Ac3H11_3283 0.57 -2.5 16,280 - Ac3H11_3283 0.57 -0.3 16,280 - Ac3H11_3283 0.57 +1.3 16,562 - Ac3H11_3283 0.75 -1.6 16,562 - Ac3H11_3283 0.75 -2.9 16,580 - Ac3H11_3283 0.76 +0.4 17,091 + -0.7 17,229 + Ac3H11_3284 0.18 -1.2 17,229 + Ac3H11_3284 0.18 -0.7 17,229 + Ac3H11_3284 0.18 +0.4 17,230 - Ac3H11_3284 0.18 +0.3 17,230 - Ac3H11_3284 0.18 +0.7 17,230 - Ac3H11_3284 0.18 -1.2 17,230 - Ac3H11_3284 0.18 +1.1 17,238 + Ac3H11_3284 0.19 -1.6 17,239 - Ac3H11_3284 0.19 -1.2 17,239 - Ac3H11_3284 0.19 -1.6 17,334 + Ac3H11_3284 0.26 -0.6 17,334 + Ac3H11_3284 0.26 +1.5 17,334 + Ac3H11_3284 0.26 +0.1 17,334 + Ac3H11_3284 0.26 +2.1 17,334 + Ac3H11_3284 0.26 -1.5 17,334 + Ac3H11_3284 0.26 +1.7 17,334 + Ac3H11_3284 0.26 +1.6 17,334 + Ac3H11_3284 0.26 -0.2 17,334 + Ac3H11_3284 0.26 -0.3 17,334 + Ac3H11_3284 0.26 -0.2 17,334 + Ac3H11_3284 0.26 +1.1 17,334 + Ac3H11_3284 0.26 -1.6 17,334 + Ac3H11_3284 0.26 +1.9 17,335 - Ac3H11_3284 0.26 +0.6 17,335 - Ac3H11_3284 0.26 +2.4 17,335 - Ac3H11_3284 0.26 -0.3 17,335 - Ac3H11_3284 0.26 +0.7 17,335 - Ac3H11_3284 0.26 -0.7 17,335 - Ac3H11_3284 0.26 -2.2 17,335 - Ac3H11_3284 0.26 -1.2 17,335 - Ac3H11_3284 0.26 +1.4 17,376 + Ac3H11_3284 0.29 -1.4 17,376 + Ac3H11_3284 0.29 +0.3 17,377 - Ac3H11_3284 0.29 +0.5 17,409 + Ac3H11_3284 0.31 +2.8 17,526 + Ac3H11_3284 0.40 +0.3 17,527 - Ac3H11_3284 0.40 +1.1 17,527 - Ac3H11_3284 0.40 +0.7 17,766 + Ac3H11_3284 0.58 -1.5 17,766 + Ac3H11_3284 0.58 -0.1 17,766 + Ac3H11_3284 0.58 +1.8 17,766 + Ac3H11_3284 0.58 +0.1 17,766 + Ac3H11_3284 0.58 +0.2 17,767 - Ac3H11_3284 0.58 +1.4 17,767 - Ac3H11_3284 0.58 -1.2 17,767 - Ac3H11_3284 0.58 +0.8 17,767 - Ac3H11_3284 0.58 -0.8 17,778 + Ac3H11_3284 0.58 +0.5 17,778 + Ac3H11_3284 0.58 +0.0 17,778 + Ac3H11_3284 0.58 +1.9 17,779 - Ac3H11_3284 0.59 -0.7 17,779 - Ac3H11_3284 0.59 -2.4 17,779 - Ac3H11_3284 0.59 +0.5 17,857 + Ac3H11_3284 0.64 -0.2 17,857 + Ac3H11_3284 0.64 -1.2 17,857 + Ac3H11_3284 0.64 +1.2 17,858 - Ac3H11_3284 0.64 -0.9 17,858 - Ac3H11_3284 0.64 -0.9 17,858 - +1.6 17,858 - Ac3H11_3284 0.64 +0.6 17,858 - Ac3H11_3284 0.64 +0.5 17,858 - Ac3H11_3284 0.64 -4.4 17,858 - Ac3H11_3284 0.64 -0.2 17,858 - Ac3H11_3284 0.64 +0.4 17,858 - Ac3H11_3284 0.64 +0.4 17,858 - Ac3H11_3284 0.64 -0.1 17,898 + Ac3H11_3284 0.67 -1.1 17,898 + Ac3H11_3284 0.67 -0.5 17,898 + Ac3H11_3284 0.67 +0.6 17,899 - Ac3H11_3284 0.67 +0.9 17,943 + Ac3H11_3284 0.71 -2.3 17,943 + Ac3H11_3284 0.71 -0.2 17,944 - Ac3H11_3284 0.71 -0.3 18,096 + Ac3H11_3284 0.82 +1.6 18,096 + Ac3H11_3284 0.82 +0.1 18,096 + Ac3H11_3284 0.82 -1.1 18,096 + Ac3H11_3284 0.82 +1.0 18,096 + Ac3H11_3284 0.82 -2.5 18,096 + Ac3H11_3284 0.82 +0.3 18,096 + Ac3H11_3284 0.82 +1.2 18,096 + Ac3H11_3284 0.82 +0.2 18,096 + Ac3H11_3284 0.82 +3.6 18,097 - Ac3H11_3284 0.82 +0.4 18,097 - Ac3H11_3284 0.82 -0.5 18,097 - Ac3H11_3284 0.82 +1.7 18,097 - Ac3H11_3284 0.82 +1.0 18,097 - Ac3H11_3284 0.82 +1.3 18,097 - Ac3H11_3284 0.82 -1.2 18,097 - Ac3H11_3284 0.82 +0.4 18,097 - Ac3H11_3284 0.82 +0.5 18,097 - Ac3H11_3284 0.82 +0.1 18,097 - Ac3H11_3284 0.82 -0.1 18,097 - Ac3H11_3284 0.82 +0.7 18,099 + Ac3H11_3284 0.82 -0.0 18,100 - Ac3H11_3284 0.82 -0.1 18,180 + Ac3H11_3284 0.88 -0.8 18,180 + Ac3H11_3284 0.88 -2.8 18,180 + Ac3H11_3284 0.88 +1.3 18,180 + Ac3H11_3284 0.88 +1.3 18,181 - Ac3H11_3284 0.88 +0.2 18,181 - Ac3H11_3284 0.88 -0.1 18,181 - Ac3H11_3284 0.88 -0.4 18,288 + +1.1 18,410 - -1.0 18,410 - +0.4 18,410 - -2.7 18,410 - +0.2 18,664 + Ac3H11_3285 0.19 +0.0 18,664 + Ac3H11_3285 0.19 -0.1 18,665 - Ac3H11_3285 0.19 +0.5 18,665 - Ac3H11_3285 0.19 -2.3 18,665 - Ac3H11_3285 0.19 +0.2 18,736 + Ac3H11_3285 0.26 -0.4 18,737 - Ac3H11_3285 0.26 -1.3 18,737 - Ac3H11_3285 0.26 -0.5 18,835 + Ac3H11_3285 0.35 -0.1 18,835 + Ac3H11_3285 0.35 +0.0 18,836 - Ac3H11_3285 0.35 -0.7 18,836 - Ac3H11_3285 0.35 -0.4
Or see this region's nucleotide sequence