Experiment: Sisomicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1234 and Ac3H11_1235 are separated by 54 nucleotides Ac3H11_1235 and Ac3H11_1236 are separated by 481 nucleotides Ac3H11_1236 and Ac3H11_1237 are separated by 64 nucleotides Ac3H11_1237 and Ac3H11_1238 are separated by 110 nucleotides
Ac3H11_1234 - FIG00932085: hypothetical protein, at 51,837 to 52,142
_1234
Ac3H11_1235 - Phosphoenolpyruvate synthase (EC 2.7.9.2), at 52,197 to 52,631
_1235
Ac3H11_1236 - Membrane protein TerC, possibly involved in tellurium resistance, at 53,113 to 53,865
_1236
Ac3H11_1237 - FIG00537205: hypothetical protein, at 53,930 to 54,397
_1237
Ac3H11_1238 - putative membrane protein, at 54,508 to 54,867
_1238
Ac3H11_1239 - Peptidase M48, Ste24p precursor, at 54,835 to 56,361
_1239
Position (kb) 53
54 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 52.153 kb on + strand at 52.153 kb on + strand at 52.154 kb on - strand at 52.174 kb on + strand at 52.174 kb on + strand at 52.175 kb on - strand at 52.175 kb on - strand at 52.249 kb on + strand, within Ac3H11_1235 at 52.250 kb on - strand, within Ac3H11_1235 at 52.432 kb on + strand, within Ac3H11_1235 at 52.432 kb on + strand, within Ac3H11_1235 at 52.432 kb on + strand, within Ac3H11_1235 at 52.433 kb on - strand, within Ac3H11_1235 at 52.433 kb on - strand, within Ac3H11_1235 at 52.501 kb on + strand, within Ac3H11_1235 at 52.501 kb on + strand, within Ac3H11_1235 at 52.501 kb on + strand, within Ac3H11_1235 at 52.501 kb on + strand, within Ac3H11_1235 at 52.501 kb on + strand, within Ac3H11_1235 at 52.502 kb on - strand, within Ac3H11_1235 at 52.502 kb on - strand, within Ac3H11_1235 at 52.516 kb on + strand, within Ac3H11_1235 at 52.516 kb on + strand, within Ac3H11_1235 at 52.516 kb on + strand, within Ac3H11_1235 at 52.516 kb on + strand, within Ac3H11_1235 at 52.517 kb on - strand, within Ac3H11_1235 at 52.517 kb on - strand, within Ac3H11_1235 at 52.662 kb on + strand at 52.662 kb on + strand at 52.663 kb on - strand at 52.663 kb on - strand at 52.663 kb on - strand at 52.710 kb on + strand at 52.710 kb on + strand at 52.710 kb on + strand at 52.710 kb on + strand at 52.710 kb on + strand at 52.711 kb on - strand at 52.711 kb on - strand at 52.730 kb on + strand at 52.730 kb on + strand at 52.730 kb on + strand at 52.730 kb on + strand at 52.730 kb on + strand at 52.730 kb on + strand at 52.730 kb on + strand at 52.730 kb on + strand at 52.730 kb on + strand at 52.731 kb on - strand at 52.731 kb on - strand at 52.731 kb on - strand at 52.731 kb on - strand at 52.731 kb on - strand at 52.738 kb on - strand at 52.738 kb on - strand at 52.738 kb on - strand at 52.805 kb on - strand at 52.805 kb on - strand at 52.805 kb on - strand at 52.805 kb on - strand at 52.805 kb on - strand at 52.805 kb on - strand at 52.818 kb on + strand at 52.818 kb on + strand at 52.818 kb on + strand at 52.818 kb on + strand at 52.818 kb on + strand at 52.818 kb on + strand at 52.818 kb on + strand at 52.818 kb on + strand at 52.818 kb on + strand at 52.818 kb on + strand at 52.818 kb on + strand at 52.819 kb on - strand at 52.819 kb on - strand at 52.819 kb on - strand at 52.819 kb on - strand at 52.819 kb on - strand at 52.819 kb on - strand at 52.819 kb on - strand at 52.819 kb on - strand at 52.819 kb on - strand at 52.876 kb on + strand at 52.877 kb on - strand at 52.877 kb on - strand at 52.877 kb on - strand at 52.877 kb on - strand at 53.041 kb on + strand at 53.042 kb on - strand at 53.064 kb on + strand at 53.064 kb on + strand at 53.064 kb on + strand at 53.095 kb on - strand at 53.100 kb on + strand at 53.100 kb on + strand at 53.101 kb on - strand at 53.101 kb on - strand at 53.101 kb on - strand at 53.101 kb on - strand at 53.101 kb on - strand at 53.101 kb on - strand at 53.101 kb on - strand at 53.112 kb on + strand at 53.112 kb on + strand at 53.113 kb on - strand at 53.113 kb on - strand at 53.767 kb on + strand, within Ac3H11_1236 at 53.767 kb on + strand, within Ac3H11_1236 at 53.767 kb on + strand, within Ac3H11_1236 at 53.767 kb on + strand, within Ac3H11_1236 at 53.767 kb on + strand, within Ac3H11_1236 at 53.767 kb on + strand, within Ac3H11_1236 at 53.767 kb on + strand, within Ac3H11_1236 at 53.767 kb on + strand, within Ac3H11_1236 at 53.767 kb on + strand, within Ac3H11_1236 at 53.768 kb on - strand, within Ac3H11_1236 at 53.768 kb on - strand, within Ac3H11_1236 at 53.768 kb on - strand, within Ac3H11_1236 at 53.768 kb on - strand, within Ac3H11_1236 at 53.768 kb on - strand, within Ac3H11_1236 at 53.768 kb on - strand, within Ac3H11_1236 at 53.768 kb on - strand, within Ac3H11_1236 at 53.838 kb on + strand at 53.839 kb on - strand at 53.839 kb on - strand at 53.930 kb on - strand at 53.948 kb on + strand at 53.948 kb on + strand at 53.948 kb on + strand at 53.948 kb on + strand at 53.948 kb on + strand at 53.948 kb on + strand at 53.948 kb on + strand at 53.948 kb on + strand at 53.948 kb on + strand at 53.949 kb on - strand at 53.949 kb on - strand at 53.966 kb on + strand at 53.966 kb on + strand at 53.966 kb on + strand at 53.966 kb on + strand at 53.966 kb on + strand at 53.967 kb on - strand at 53.967 kb on - strand at 53.967 kb on - strand at 54.172 kb on + strand, within Ac3H11_1237 at 54.172 kb on + strand, within Ac3H11_1237 at 54.172 kb on + strand, within Ac3H11_1237 at 54.172 kb on + strand, within Ac3H11_1237 at 54.173 kb on - strand, within Ac3H11_1237 at 54.173 kb on - strand, within Ac3H11_1237 at 54.173 kb on - strand, within Ac3H11_1237 at 54.453 kb on - strand at 54.502 kb on + strand at 54.502 kb on + strand at 54.502 kb on + strand at 54.502 kb on + strand at 54.502 kb on + strand at 54.502 kb on + strand at 54.502 kb on + strand at 54.502 kb on + strand at 54.502 kb on + strand at 54.568 kb on + strand, within Ac3H11_1238 at 54.568 kb on + strand, within Ac3H11_1238 at 54.568 kb on + strand, within Ac3H11_1238 at 54.568 kb on + strand, within Ac3H11_1238 at 54.568 kb on + strand, within Ac3H11_1238 at 54.568 kb on + strand, within Ac3H11_1238 at 54.569 kb on - strand, within Ac3H11_1238 at 54.569 kb on - strand, within Ac3H11_1238 at 54.569 kb on - strand, within Ac3H11_1238 at 54.569 kb on - strand, within Ac3H11_1238 at 54.569 kb on - strand, within Ac3H11_1238 at 54.569 kb on - strand, within Ac3H11_1238 at 54.569 kb on - strand, within Ac3H11_1238 at 54.569 kb on - strand, within Ac3H11_1238 at 54.569 kb on - strand, within Ac3H11_1238 at 54.569 kb on - strand, within Ac3H11_1238 at 54.574 kb on + strand, within Ac3H11_1238 at 54.574 kb on + strand, within Ac3H11_1238 at 54.574 kb on + strand, within Ac3H11_1238 at 54.574 kb on + strand, within Ac3H11_1238 at 54.574 kb on + strand, within Ac3H11_1238 at 54.574 kb on + strand, within Ac3H11_1238 at 54.575 kb on - strand, within Ac3H11_1238 at 54.575 kb on - strand, within Ac3H11_1238 at 54.575 kb on - strand at 54.575 kb on - strand, within Ac3H11_1238 at 54.575 kb on - strand, within Ac3H11_1238 at 54.575 kb on - strand, within Ac3H11_1238 at 54.808 kb on + strand, within Ac3H11_1238 at 54.808 kb on + strand, within Ac3H11_1238 at 54.809 kb on - strand, within Ac3H11_1238 at 54.809 kb on - strand, within Ac3H11_1238 at 54.809 kb on - strand, within Ac3H11_1238
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.001 mg/ml remove 52,153 + +0.5 52,153 + -4.2 52,154 - +0.8 52,174 + +1.2 52,174 + +0.1 52,175 - +0.5 52,175 - +0.4 52,249 + Ac3H11_1235 0.12 -0.4 52,250 - Ac3H11_1235 0.12 +0.8 52,432 + Ac3H11_1235 0.54 -1.3 52,432 + Ac3H11_1235 0.54 -1.0 52,432 + Ac3H11_1235 0.54 -0.2 52,433 - Ac3H11_1235 0.54 +1.0 52,433 - Ac3H11_1235 0.54 -1.2 52,501 + Ac3H11_1235 0.70 -1.7 52,501 + Ac3H11_1235 0.70 -1.5 52,501 + Ac3H11_1235 0.70 -3.1 52,501 + Ac3H11_1235 0.70 -0.4 52,501 + Ac3H11_1235 0.70 -1.0 52,502 - Ac3H11_1235 0.70 +0.4 52,502 - Ac3H11_1235 0.70 -2.5 52,516 + Ac3H11_1235 0.73 -0.8 52,516 + Ac3H11_1235 0.73 +1.0 52,516 + Ac3H11_1235 0.73 +0.6 52,516 + Ac3H11_1235 0.73 -0.4 52,517 - Ac3H11_1235 0.74 -1.9 52,517 - Ac3H11_1235 0.74 +1.1 52,662 + -0.1 52,662 + +0.7 52,663 - -0.1 52,663 - +0.3 52,663 - -0.6 52,710 + -0.1 52,710 + +0.8 52,710 + +1.1 52,710 + -1.6 52,710 + +0.6 52,711 - -0.7 52,711 - -0.2 52,730 + +1.9 52,730 + +0.0 52,730 + -0.1 52,730 + -0.7 52,730 + +0.1 52,730 + +1.4 52,730 + -0.3 52,730 + +0.0 52,730 + -1.3 52,731 - +0.1 52,731 - -0.4 52,731 - +0.7 52,731 - +0.2 52,731 - -1.2 52,738 - -3.2 52,738 - -1.0 52,738 - -0.7 52,805 - -1.0 52,805 - -2.0 52,805 - +0.6 52,805 - +0.8 52,805 - -1.5 52,805 - -3.1 52,818 + -1.0 52,818 + +0.9 52,818 + -0.9 52,818 + -2.3 52,818 + +0.6 52,818 + -1.4 52,818 + -1.2 52,818 + +0.0 52,818 + +0.4 52,818 + +0.8 52,818 + -2.3 52,819 - -2.2 52,819 - +0.8 52,819 - +0.9 52,819 - +1.1 52,819 - +1.6 52,819 - -0.5 52,819 - +0.5 52,819 - +0.1 52,819 - +0.0 52,876 + +1.1 52,877 - +0.0 52,877 - +0.4 52,877 - -0.2 52,877 - +1.1 53,041 + -3.0 53,042 - -1.1 53,064 + -3.2 53,064 + -2.3 53,064 + -0.8 53,095 - +1.1 53,100 + -1.2 53,100 + +0.1 53,101 - +1.3 53,101 - +0.3 53,101 - +1.2 53,101 - -0.9 53,101 - +0.4 53,101 - +0.5 53,101 - -1.9 53,112 + +1.5 53,112 + -0.1 53,113 - +0.6 53,113 - +1.0 53,767 + Ac3H11_1236 0.87 +0.2 53,767 + Ac3H11_1236 0.87 +0.4 53,767 + Ac3H11_1236 0.87 +0.4 53,767 + Ac3H11_1236 0.87 +0.8 53,767 + Ac3H11_1236 0.87 -0.9 53,767 + Ac3H11_1236 0.87 -0.5 53,767 + Ac3H11_1236 0.87 -0.4 53,767 + Ac3H11_1236 0.87 -0.4 53,767 + Ac3H11_1236 0.87 -0.6 53,768 - Ac3H11_1236 0.87 +0.9 53,768 - Ac3H11_1236 0.87 +0.1 53,768 - Ac3H11_1236 0.87 -0.5 53,768 - Ac3H11_1236 0.87 +1.4 53,768 - Ac3H11_1236 0.87 +1.6 53,768 - Ac3H11_1236 0.87 -1.1 53,768 - Ac3H11_1236 0.87 +0.7 53,838 + -0.7 53,839 - +1.6 53,839 - +0.6 53,930 - -0.4 53,948 + +0.4 53,948 + -1.4 53,948 + -0.4 53,948 + -2.3 53,948 + +1.4 53,948 + -0.9 53,948 + -0.7 53,948 + -0.6 53,948 + -1.7 53,949 - +0.0 53,949 - +1.3 53,966 + +0.9 53,966 + -0.8 53,966 + -1.2 53,966 + +0.6 53,966 + +0.1 53,967 - +0.8 53,967 - -0.2 53,967 - +0.9 54,172 + Ac3H11_1237 0.52 +0.8 54,172 + Ac3H11_1237 0.52 -0.9 54,172 + Ac3H11_1237 0.52 +0.2 54,172 + Ac3H11_1237 0.52 +0.2 54,173 - Ac3H11_1237 0.52 +0.1 54,173 - Ac3H11_1237 0.52 +0.5 54,173 - Ac3H11_1237 0.52 -0.0 54,453 - -0.1 54,502 + -0.9 54,502 + -1.3 54,502 + -1.0 54,502 + -0.4 54,502 + -3.5 54,502 + -1.5 54,502 + -0.6 54,502 + -0.7 54,502 + -2.7 54,568 + Ac3H11_1238 0.17 -3.3 54,568 + Ac3H11_1238 0.17 -0.6 54,568 + Ac3H11_1238 0.17 +1.1 54,568 + Ac3H11_1238 0.17 -1.5 54,568 + Ac3H11_1238 0.17 +0.1 54,568 + Ac3H11_1238 0.17 +1.3 54,569 - Ac3H11_1238 0.17 +0.5 54,569 - Ac3H11_1238 0.17 -0.5 54,569 - Ac3H11_1238 0.17 +1.5 54,569 - Ac3H11_1238 0.17 -0.8 54,569 - Ac3H11_1238 0.17 -1.0 54,569 - Ac3H11_1238 0.17 -3.5 54,569 - Ac3H11_1238 0.17 +0.6 54,569 - Ac3H11_1238 0.17 +0.4 54,569 - Ac3H11_1238 0.17 -2.5 54,569 - Ac3H11_1238 0.17 -0.2 54,574 + Ac3H11_1238 0.18 -0.7 54,574 + Ac3H11_1238 0.18 -1.4 54,574 + Ac3H11_1238 0.18 -1.2 54,574 + Ac3H11_1238 0.18 +0.1 54,574 + Ac3H11_1238 0.18 -1.2 54,574 + Ac3H11_1238 0.18 -0.6 54,575 - Ac3H11_1238 0.19 +0.6 54,575 - Ac3H11_1238 0.19 -1.6 54,575 - +0.6 54,575 - Ac3H11_1238 0.19 -1.1 54,575 - Ac3H11_1238 0.19 -0.8 54,575 - Ac3H11_1238 0.19 -1.4 54,808 + Ac3H11_1238 0.83 +0.3 54,808 + Ac3H11_1238 0.83 +0.9 54,809 - Ac3H11_1238 0.84 -1.6 54,809 - Ac3H11_1238 0.84 -0.2 54,809 - Ac3H11_1238 0.84 +0.3
Or see this region's nucleotide sequence