Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27295 and AZOBR_RS27300 are separated by 608 nucleotides AZOBR_RS27300 and AZOBR_RS27305 are separated by 417 nucleotides
AZOBR_RS27295: AZOBR_RS27295 - hypothetical protein, at 266,596 to 267,804
_RS27295
AZOBR_RS27300: AZOBR_RS27300 - hypothetical protein, at 268,413 to 268,670
_RS27300
AZOBR_RS27305: AZOBR_RS27305 - hypothetical protein, at 269,088 to 270,512
_RS27305
Position (kb) 268
269 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 267.490 kb on + strand, within AZOBR_RS27295 at 267.565 kb on + strand, within AZOBR_RS27295 at 267.566 kb on - strand, within AZOBR_RS27295 at 267.637 kb on + strand, within AZOBR_RS27295 at 267.638 kb on - strand, within AZOBR_RS27295 at 267.638 kb on - strand, within AZOBR_RS27295 at 267.638 kb on - strand, within AZOBR_RS27295 at 267.670 kb on + strand, within AZOBR_RS27295 at 267.670 kb on + strand, within AZOBR_RS27295 at 267.670 kb on + strand, within AZOBR_RS27295 at 267.671 kb on - strand, within AZOBR_RS27295 at 267.671 kb on - strand, within AZOBR_RS27295 at 267.671 kb on - strand, within AZOBR_RS27295 at 267.725 kb on - strand at 267.868 kb on - strand at 268.031 kb on + strand at 268.031 kb on + strand at 268.032 kb on - strand at 268.032 kb on - strand at 268.032 kb on - strand at 268.032 kb on - strand at 268.053 kb on + strand at 268.056 kb on + strand at 268.755 kb on + strand at 268.755 kb on + strand at 268.756 kb on - strand at 268.756 kb on - strand at 269.265 kb on + strand, within AZOBR_RS27305 at 269.266 kb on - strand, within AZOBR_RS27305 at 269.295 kb on + strand, within AZOBR_RS27305 at 269.604 kb on + strand, within AZOBR_RS27305 at 269.604 kb on + strand, within AZOBR_RS27305
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 267,490 + AZOBR_RS27295 0.74 +0.1 267,565 + AZOBR_RS27295 0.80 +0.7 267,566 - AZOBR_RS27295 0.80 -0.0 267,637 + AZOBR_RS27295 0.86 +1.0 267,638 - AZOBR_RS27295 0.86 +1.1 267,638 - AZOBR_RS27295 0.86 +0.3 267,638 - AZOBR_RS27295 0.86 +1.2 267,670 + AZOBR_RS27295 0.89 +0.3 267,670 + AZOBR_RS27295 0.89 -0.3 267,670 + AZOBR_RS27295 0.89 -3.0 267,671 - AZOBR_RS27295 0.89 +1.1 267,671 - AZOBR_RS27295 0.89 +0.7 267,671 - AZOBR_RS27295 0.89 +0.4 267,725 - -1.7 267,868 - +0.7 268,031 + -3.2 268,031 + -0.0 268,032 - -0.6 268,032 - +0.4 268,032 - -1.7 268,032 - +2.2 268,053 + -1.0 268,056 + -1.5 268,755 + -0.1 268,755 + +0.0 268,756 - +0.9 268,756 - -0.8 269,265 + AZOBR_RS27305 0.12 +0.9 269,266 - AZOBR_RS27305 0.12 +0.6 269,295 + AZOBR_RS27305 0.15 -0.0 269,604 + AZOBR_RS27305 0.36 -0.8 269,604 + AZOBR_RS27305 0.36 -1.1
Or see this region's nucleotide sequence