Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23050 and AZOBR_RS23055 are separated by 181 nucleotides AZOBR_RS23055 and AZOBR_RS23060 are separated by 167 nucleotides
AZOBR_RS23050: AZOBR_RS23050 - decarboxylase, at 186,016 to 187,563
_RS23050
AZOBR_RS23055: AZOBR_RS23055 - hypothetical protein, at 187,745 to 188,689
_RS23055
AZOBR_RS23060: AZOBR_RS23060 - hypothetical protein, at 188,857 to 189,729
_RS23060
Position (kb) 187
188
189 Strain fitness (log2 ratio) -2
-1
0
1 at 187.121 kb on - strand, within AZOBR_RS23050 at 187.121 kb on - strand, within AZOBR_RS23050 at 187.267 kb on + strand, within AZOBR_RS23050 at 187.267 kb on + strand, within AZOBR_RS23050 at 187.267 kb on + strand, within AZOBR_RS23050 at 187.267 kb on + strand, within AZOBR_RS23050 at 187.268 kb on - strand, within AZOBR_RS23050 at 187.650 kb on + strand at 187.650 kb on + strand at 187.651 kb on - strand at 188.168 kb on + strand, within AZOBR_RS23055 at 188.168 kb on + strand, within AZOBR_RS23055 at 188.168 kb on + strand, within AZOBR_RS23055 at 188.169 kb on - strand, within AZOBR_RS23055 at 188.169 kb on - strand, within AZOBR_RS23055 at 188.169 kb on - strand, within AZOBR_RS23055 at 188.273 kb on + strand, within AZOBR_RS23055 at 188.274 kb on - strand, within AZOBR_RS23055 at 188.291 kb on + strand, within AZOBR_RS23055 at 188.292 kb on - strand, within AZOBR_RS23055 at 188.438 kb on + strand, within AZOBR_RS23055 at 188.438 kb on + strand, within AZOBR_RS23055 at 188.438 kb on + strand, within AZOBR_RS23055 at 188.438 kb on + strand, within AZOBR_RS23055 at 188.439 kb on - strand, within AZOBR_RS23055 at 188.439 kb on - strand, within AZOBR_RS23055 at 188.439 kb on - strand, within AZOBR_RS23055 at 188.439 kb on - strand, within AZOBR_RS23055 at 188.861 kb on + strand at 188.861 kb on + strand at 188.862 kb on - strand at 188.862 kb on - strand at 188.862 kb on - strand at 188.862 kb on - strand at 189.166 kb on + strand, within AZOBR_RS23060 at 189.167 kb on - strand, within AZOBR_RS23060 at 189.676 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 187,121 - AZOBR_RS23050 0.71 +0.7 187,121 - AZOBR_RS23050 0.71 +0.4 187,267 + AZOBR_RS23050 0.81 -1.8 187,267 + AZOBR_RS23050 0.81 +0.3 187,267 + AZOBR_RS23050 0.81 +0.6 187,267 + AZOBR_RS23050 0.81 +0.6 187,268 - AZOBR_RS23050 0.81 +0.2 187,650 + +0.4 187,650 + -1.6 187,651 - -0.7 188,168 + AZOBR_RS23055 0.45 +0.5 188,168 + AZOBR_RS23055 0.45 +0.1 188,168 + AZOBR_RS23055 0.45 -1.0 188,169 - AZOBR_RS23055 0.45 +0.4 188,169 - AZOBR_RS23055 0.45 +0.1 188,169 - AZOBR_RS23055 0.45 -0.2 188,273 + AZOBR_RS23055 0.56 +1.7 188,274 - AZOBR_RS23055 0.56 +0.2 188,291 + AZOBR_RS23055 0.58 +0.4 188,292 - AZOBR_RS23055 0.58 +1.1 188,438 + AZOBR_RS23055 0.73 +0.6 188,438 + AZOBR_RS23055 0.73 -0.3 188,438 + AZOBR_RS23055 0.73 +0.5 188,438 + AZOBR_RS23055 0.73 +0.6 188,439 - AZOBR_RS23055 0.73 -2.0 188,439 - AZOBR_RS23055 0.73 +1.0 188,439 - AZOBR_RS23055 0.73 +1.0 188,439 - AZOBR_RS23055 0.73 +0.9 188,861 + -1.1 188,861 + -0.0 188,862 - +0.3 188,862 - -0.1 188,862 - +0.7 188,862 - +0.3 189,166 + AZOBR_RS23060 0.35 -0.0 189,167 - AZOBR_RS23060 0.36 +0.6 189,676 + +0.7
Or see this region's nucleotide sequence