Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20150 and AO353_20155 are separated by 32 nucleotides AO353_20155 and AO353_20160 are separated by 58 nucleotides AO353_20160 and AO353_20165 are separated by 77 nucleotides AO353_20165 and AO353_20170 are separated by 400 nucleotides AO353_20170 and AO353_20175 are separated by 92 nucleotides AO353_20175 and AO353_20180 are separated by 106 nucleotides
AO353_20150: AO353_20150 - tRNA-Arg, at 4,431,435 to 4,431,511
_20150
AO353_20155: AO353_20155 - tRNA-His, at 4,431,544 to 4,431,619
_20155
AO353_20160: AO353_20160 - tRNA-Leu, at 4,431,678 to 4,431,762
_20160
AO353_20165: AO353_20165 - tRNA-His, at 4,431,840 to 4,431,915
_20165
AO353_20170: AO353_20170 - trigger factor, at 4,432,316 to 4,433,626
_20170
AO353_20175: AO353_20175 - ATP-dependent Clp protease proteolytic subunit, at 4,433,719 to 4,434,360
_20175
AO353_20180: AO353_20180 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 4,434,467 to 4,435,750
_20180
Position (kb)
4432
4433
4434 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4431.620 kb on + strand at 4431.620 kb on + strand at 4431.663 kb on + strand at 4431.663 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.666 kb on + strand at 4431.765 kb on + strand at 4431.765 kb on + strand at 4431.765 kb on + strand at 4431.765 kb on + strand at 4431.766 kb on - strand at 4431.830 kb on - strand at 4431.837 kb on - strand at 4431.837 kb on - strand at 4431.837 kb on - strand at 4431.848 kb on - strand, within AO353_20165 at 4431.916 kb on + strand at 4431.916 kb on + strand at 4431.965 kb on + strand at 4431.966 kb on - strand at 4431.966 kb on - strand at 4431.966 kb on - strand at 4431.971 kb on + strand at 4431.971 kb on + strand at 4431.972 kb on - strand at 4431.972 kb on - strand at 4431.972 kb on - strand at 4431.972 kb on - strand at 4432.021 kb on + strand at 4432.021 kb on + strand at 4432.021 kb on + strand at 4432.022 kb on - strand at 4432.022 kb on - strand at 4432.022 kb on - strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.104 kb on + strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.105 kb on - strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.106 kb on + strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.107 kb on - strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.108 kb on + strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.109 kb on - strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.110 kb on + strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.111 kb on - strand at 4432.147 kb on + strand at 4432.147 kb on + strand at 4432.147 kb on + strand at 4432.147 kb on + strand at 4432.147 kb on + strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.148 kb on - strand at 4432.169 kb on + strand at 4432.169 kb on + strand at 4432.169 kb on + strand at 4432.169 kb on + strand at 4432.169 kb on + strand at 4432.169 kb on + strand at 4432.169 kb on + strand at 4432.169 kb on + strand at 4432.170 kb on - strand at 4432.170 kb on - strand at 4432.170 kb on - strand at 4432.170 kb on - strand at 4432.170 kb on - strand at 4432.170 kb on - strand at 4432.170 kb on - strand at 4432.170 kb on - strand at 4432.170 kb on - strand at 4432.190 kb on - strand at 4432.223 kb on - strand at 4432.223 kb on - strand at 4432.249 kb on + strand at 4432.250 kb on - strand at 4432.250 kb on - strand at 4432.250 kb on - strand at 4432.250 kb on - strand at 4432.311 kb on + strand at 4432.337 kb on - strand at 4432.337 kb on - strand at 4432.487 kb on + strand, within AO353_20170 at 4432.541 kb on + strand, within AO353_20170 at 4432.541 kb on + strand, within AO353_20170 at 4432.976 kb on + strand, within AO353_20170 at 4432.977 kb on - strand, within AO353_20170 at 4432.977 kb on - strand, within AO353_20170 at 4432.977 kb on - strand, within AO353_20170 at 4432.977 kb on - strand, within AO353_20170 at 4433.086 kb on + strand, within AO353_20170 at 4433.185 kb on - strand, within AO353_20170 at 4433.185 kb on - strand, within AO353_20170 at 4433.384 kb on + strand, within AO353_20170 at 4433.477 kb on + strand, within AO353_20170 at 4433.477 kb on + strand, within AO353_20170 at 4433.477 kb on + strand, within AO353_20170 at 4433.477 kb on + strand, within AO353_20170 at 4433.477 kb on + strand, within AO353_20170 at 4433.582 kb on + strand at 4433.582 kb on + strand at 4433.654 kb on + strand at 4433.654 kb on + strand at 4433.654 kb on + strand at 4433.655 kb on - strand at 4433.655 kb on - strand at 4433.693 kb on + strand at 4433.693 kb on + strand at 4433.693 kb on + strand at 4433.693 kb on + strand at 4433.697 kb on + strand at 4433.697 kb on + strand at 4433.697 kb on + strand at 4433.697 kb on + strand at 4433.697 kb on + strand at 4433.698 kb on - strand at 4433.698 kb on - strand at 4433.698 kb on - strand at 4433.734 kb on + strand at 4433.735 kb on - strand at 4433.735 kb on - strand at 4433.735 kb on - strand at 4433.819 kb on - strand, within AO353_20175 at 4433.827 kb on + strand, within AO353_20175 at 4433.881 kb on + strand, within AO353_20175 at 4433.882 kb on - strand, within AO353_20175 at 4433.953 kb on + strand, within AO353_20175 at 4434.036 kb on + strand, within AO353_20175 at 4434.037 kb on - strand, within AO353_20175 at 4434.061 kb on - strand, within AO353_20175 at 4434.345 kb on + strand at 4434.346 kb on - strand at 4434.346 kb on - strand at 4434.346 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,431,620 + -1.1 4,431,620 + +0.5 4,431,663 + -0.5 4,431,663 + +0.4 4,431,666 + -0.4 4,431,666 + -0.8 4,431,666 + +0.5 4,431,666 + -1.1 4,431,666 + +0.1 4,431,666 + +0.3 4,431,666 + -1.7 4,431,666 + -0.7 4,431,666 + +0.5 4,431,765 + -0.4 4,431,765 + +0.1 4,431,765 + +0.1 4,431,765 + +0.1 4,431,766 - +0.1 4,431,830 - +1.5 4,431,837 - +0.1 4,431,837 - +0.6 4,431,837 - +2.1 4,431,848 - AO353_20165 0.11 -0.7 4,431,916 + -0.5 4,431,916 + +0.4 4,431,965 + +0.1 4,431,966 - -0.6 4,431,966 - -1.8 4,431,966 - -1.3 4,431,971 + -0.9 4,431,971 + -0.5 4,431,972 - -0.8 4,431,972 - -0.9 4,431,972 - +0.3 4,431,972 - +0.8 4,432,021 + -0.7 4,432,021 + +0.1 4,432,021 + +0.5 4,432,022 - -0.1 4,432,022 - +0.3 4,432,022 - -0.5 4,432,104 + -0.6 4,432,104 + +1.1 4,432,104 + -0.9 4,432,104 + +0.4 4,432,104 + +1.3 4,432,104 + -0.8 4,432,104 + +0.3 4,432,104 + +0.6 4,432,104 + -0.5 4,432,104 + +0.1 4,432,104 + +0.8 4,432,104 + -1.0 4,432,104 + +1.2 4,432,104 + -0.1 4,432,104 + -0.6 4,432,104 + -1.3 4,432,104 + +0.2 4,432,104 + +0.1 4,432,104 + -0.5 4,432,104 + -1.4 4,432,104 + +1.1 4,432,104 + -0.3 4,432,104 + +0.1 4,432,105 - -1.2 4,432,105 - +0.1 4,432,105 - -0.0 4,432,105 - +0.1 4,432,105 - +0.8 4,432,105 - -1.1 4,432,105 - -0.5 4,432,105 - -0.7 4,432,105 - -1.1 4,432,105 - +2.1 4,432,105 - -0.1 4,432,105 - -1.5 4,432,105 - +0.3 4,432,105 - -0.9 4,432,105 - -1.2 4,432,105 - +0.1 4,432,105 - -0.3 4,432,105 - -1.5 4,432,105 - -0.1 4,432,105 - -0.5 4,432,106 + +0.7 4,432,106 + +0.5 4,432,106 + -0.7 4,432,106 + +0.4 4,432,106 + -0.5 4,432,106 + -0.7 4,432,106 + +0.1 4,432,106 + -0.0 4,432,106 + +0.1 4,432,106 + -0.7 4,432,106 + -0.7 4,432,106 + +0.3 4,432,106 + +1.1 4,432,106 + +1.1 4,432,106 + +0.1 4,432,106 + -0.3 4,432,106 + +0.5 4,432,106 + +0.3 4,432,106 + +0.6 4,432,106 + +0.5 4,432,106 + -0.3 4,432,106 + -0.5 4,432,106 + -0.5 4,432,106 + -0.5 4,432,106 + +0.3 4,432,107 - +1.6 4,432,107 - -0.7 4,432,107 - +0.2 4,432,107 - +1.1 4,432,107 - -0.9 4,432,107 - +3.1 4,432,107 - -1.6 4,432,107 - +0.1 4,432,107 - -0.1 4,432,107 - +1.1 4,432,107 - +0.3 4,432,107 - +0.2 4,432,108 + -0.5 4,432,108 + +0.1 4,432,108 + -0.1 4,432,108 + +1.0 4,432,108 + -0.5 4,432,108 + +0.8 4,432,108 + +0.7 4,432,108 + -0.4 4,432,108 + +1.5 4,432,108 + -0.9 4,432,108 + +0.2 4,432,108 + +0.7 4,432,108 + +0.4 4,432,108 + +0.6 4,432,108 + +0.5 4,432,108 + -0.9 4,432,108 + +0.6 4,432,108 + +1.6 4,432,108 + -1.3 4,432,108 + -0.4 4,432,108 + -0.1 4,432,108 + +0.5 4,432,108 + +2.1 4,432,108 + -0.2 4,432,109 - +0.5 4,432,109 - -1.3 4,432,109 - +0.2 4,432,109 - -0.8 4,432,109 - +0.4 4,432,109 - +1.1 4,432,109 - -0.4 4,432,109 - -0.9 4,432,109 - -2.1 4,432,109 - +0.9 4,432,109 - +0.5 4,432,109 - -1.5 4,432,109 - -0.5 4,432,109 - +0.6 4,432,109 - -0.9 4,432,109 - +0.3 4,432,109 - -0.7 4,432,109 - -0.7 4,432,109 - +1.1 4,432,109 - +0.3 4,432,109 - -0.3 4,432,109 - -0.5 4,432,109 - -1.5 4,432,109 - -0.1 4,432,109 - -1.3 4,432,109 - -0.4 4,432,109 - -0.2 4,432,109 - +0.3 4,432,110 + -0.9 4,432,110 + -0.7 4,432,110 + +0.4 4,432,110 + +1.0 4,432,110 + -1.0 4,432,110 + -1.1 4,432,110 + -0.4 4,432,110 + +0.7 4,432,110 + -0.9 4,432,110 + -0.8 4,432,110 + -1.7 4,432,111 - +0.1 4,432,111 - -0.9 4,432,111 - -0.2 4,432,111 - -1.3 4,432,111 - +0.1 4,432,111 - +0.1 4,432,111 - -0.5 4,432,111 - -1.9 4,432,111 - -0.4 4,432,111 - +0.8 4,432,147 + +0.3 4,432,147 + +0.5 4,432,147 + +1.0 4,432,147 + -0.8 4,432,147 + -1.0 4,432,148 - -0.9 4,432,148 - +1.1 4,432,148 - -0.7 4,432,148 - -0.7 4,432,148 - -1.3 4,432,148 - -0.1 4,432,148 - -0.6 4,432,148 - +0.3 4,432,148 - +0.7 4,432,148 - +0.3 4,432,169 + +0.2 4,432,169 + +0.2 4,432,169 + +0.3 4,432,169 + +1.3 4,432,169 + +1.1 4,432,169 + +0.2 4,432,169 + -2.3 4,432,169 + +0.9 4,432,170 - -0.4 4,432,170 - -1.8 4,432,170 - +0.6 4,432,170 - -1.7 4,432,170 - -0.3 4,432,170 - -2.1 4,432,170 - +0.1 4,432,170 - +0.4 4,432,170 - +1.8 4,432,190 - +0.1 4,432,223 - -1.3 4,432,223 - -0.7 4,432,249 + -0.9 4,432,250 - +1.1 4,432,250 - -2.5 4,432,250 - -0.7 4,432,250 - -1.7 4,432,311 + -0.9 4,432,337 - -0.1 4,432,337 - -1.7 4,432,487 + AO353_20170 0.13 -2.4 4,432,541 + AO353_20170 0.17 -0.4 4,432,541 + AO353_20170 0.17 -0.5 4,432,976 + AO353_20170 0.50 -1.9 4,432,977 - AO353_20170 0.50 -0.9 4,432,977 - AO353_20170 0.50 -1.3 4,432,977 - AO353_20170 0.50 +0.3 4,432,977 - AO353_20170 0.50 +0.3 4,433,086 + AO353_20170 0.59 +0.7 4,433,185 - AO353_20170 0.66 -1.5 4,433,185 - AO353_20170 0.66 -1.3 4,433,384 + AO353_20170 0.81 +0.5 4,433,477 + AO353_20170 0.89 +0.1 4,433,477 + AO353_20170 0.89 +1.1 4,433,477 + AO353_20170 0.89 -1.3 4,433,477 + AO353_20170 0.89 -0.9 4,433,477 + AO353_20170 0.89 -0.9 4,433,582 + -0.9 4,433,582 + +0.3 4,433,654 + +2.6 4,433,654 + +1.1 4,433,654 + -0.2 4,433,655 - -0.7 4,433,655 - +1.5 4,433,693 + +0.1 4,433,693 + +0.3 4,433,693 + -1.1 4,433,693 + -1.5 4,433,697 + -0.1 4,433,697 + +0.8 4,433,697 + -1.8 4,433,697 + +0.6 4,433,697 + +0.3 4,433,698 - -2.6 4,433,698 - -1.3 4,433,698 - -2.3 4,433,734 + -0.5 4,433,735 - -0.5 4,433,735 - -1.3 4,433,735 - -2.6 4,433,819 - AO353_20175 0.16 -1.3 4,433,827 + AO353_20175 0.17 -1.5 4,433,881 + AO353_20175 0.25 -1.7 4,433,882 - AO353_20175 0.25 -1.4 4,433,953 + AO353_20175 0.36 -1.9 4,434,036 + AO353_20175 0.49 -1.7 4,434,037 - AO353_20175 0.50 -0.5 4,434,061 - AO353_20175 0.53 -1.3 4,434,345 + +0.6 4,434,346 - -1.7 4,434,346 - -2.5 4,434,346 - -2.1
Or see this region's nucleotide sequence