Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13665

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_13660 and AO353_13665 are separated by 197 nucleotidesAO353_13665 and AO353_13670 are separated by 30 nucleotides AO353_13660: AO353_13660 - tRNA-dihydrouridine synthase B, at 3,033,556 to 3,034,566 _13660 AO353_13665: AO353_13665 - hypothetical protein, at 3,034,764 to 3,036,026 _13665 AO353_13670: AO353_13670 - ribosomal protein L11 methyltransferase, at 3,036,057 to 3,036,935 _13670 Position (kb) 3034 3035 3036 3037Strain fitness (log2 ratio) -2 -1 0 1 2at 3033.787 kb on - strand, within AO353_13660at 3033.787 kb on - strand, within AO353_13660at 3033.787 kb on - strand, within AO353_13660at 3033.787 kb on - strand, within AO353_13660at 3033.787 kb on - strand, within AO353_13660at 3033.840 kb on - strand, within AO353_13660at 3033.840 kb on - strand, within AO353_13660at 3033.840 kb on - strand, within AO353_13660at 3033.840 kb on - strand, within AO353_13660at 3033.840 kb on - strand, within AO353_13660at 3033.840 kb on - strand, within AO353_13660at 3033.840 kb on - strand, within AO353_13660at 3033.840 kb on - strand, within AO353_13660at 3033.890 kb on - strand, within AO353_13660at 3034.011 kb on - strand, within AO353_13660at 3034.011 kb on - strand, within AO353_13660at 3034.011 kb on - strand, within AO353_13660at 3034.029 kb on - strand, within AO353_13660at 3034.029 kb on - strand, within AO353_13660at 3034.029 kb on - strand, within AO353_13660at 3034.273 kb on - strand, within AO353_13660at 3034.273 kb on - strand, within AO353_13660at 3034.448 kb on - strand, within AO353_13660at 3034.448 kb on - strand, within AO353_13660at 3034.448 kb on - strand, within AO353_13660at 3034.448 kb on - strand, within AO353_13660at 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.540 kb on - strandat 3034.542 kb on - strandat 3034.567 kb on - strandat 3034.567 kb on - strandat 3034.567 kb on - strandat 3034.659 kb on + strandat 3034.674 kb on + strandat 3034.674 kb on + strandat 3034.674 kb on + strandat 3034.675 kb on - strandat 3034.675 kb on - strandat 3034.675 kb on - strandat 3034.675 kb on - strandat 3034.675 kb on - strandat 3034.675 kb on - strandat 3034.675 kb on - strandat 3034.682 kb on + strandat 3034.683 kb on - strandat 3034.683 kb on - strandat 3034.683 kb on - strandat 3034.683 kb on - strandat 3034.683 kb on - strandat 3034.792 kb on + strandat 3034.792 kb on + strandat 3034.792 kb on + strandat 3034.793 kb on - strandat 3034.793 kb on - strandat 3034.891 kb on + strand, within AO353_13665at 3034.891 kb on + strand, within AO353_13665at 3034.892 kb on - strand, within AO353_13665at 3034.993 kb on + strand, within AO353_13665at 3034.993 kb on + strand, within AO353_13665at 3034.994 kb on - strand, within AO353_13665at 3034.994 kb on - strand, within AO353_13665at 3034.994 kb on - strand, within AO353_13665at 3034.994 kb on - strand, within AO353_13665at 3035.010 kb on + strand, within AO353_13665at 3035.010 kb on + strand, within AO353_13665at 3035.011 kb on - strand, within AO353_13665at 3035.171 kb on - strand, within AO353_13665at 3035.171 kb on - strand, within AO353_13665at 3035.179 kb on + strand, within AO353_13665at 3035.179 kb on + strand, within AO353_13665at 3035.179 kb on + strand, within AO353_13665at 3035.179 kb on + strand, within AO353_13665at 3035.179 kb on + strand, within AO353_13665at 3035.180 kb on - strand, within AO353_13665at 3035.180 kb on - strand, within AO353_13665at 3035.180 kb on - strand, within AO353_13665at 3035.180 kb on - strand, within AO353_13665at 3035.180 kb on - strand, within AO353_13665at 3035.829 kb on - strand, within AO353_13665at 3035.829 kb on - strand, within AO353_13665at 3035.865 kb on - strand, within AO353_13665at 3036.041 kb on + strandat 3036.041 kb on + strandat 3036.041 kb on + strandat 3036.130 kb on + strandat 3036.130 kb on + strandat 3036.130 kb on + strandat 3036.131 kb on - strandat 3036.131 kb on - strandat 3036.131 kb on - strandat 3036.131 kb on - strandat 3036.261 kb on + strand, within AO353_13670at 3036.261 kb on + strand, within AO353_13670at 3036.262 kb on - strand, within AO353_13670at 3036.298 kb on + strand, within AO353_13670at 3036.299 kb on - strand, within AO353_13670at 3036.299 kb on - strand, within AO353_13670at 3036.299 kb on - strand, within AO353_13670at 3036.299 kb on - strand, within AO353_13670at 3036.299 kb on - strand, within AO353_13670at 3036.453 kb on + strand, within AO353_13670at 3036.453 kb on + strand, within AO353_13670at 3036.453 kb on + strand, within AO353_13670at 3036.454 kb on - strand, within AO353_13670at 3036.883 kb on + strandat 3036.883 kb on + strandat 3036.883 kb on + strandat 3036.884 kb on - strandat 3036.884 kb on - strandat 3036.884 kb on - strandat 3036.957 kb on + strandat 3036.957 kb on + strandat 3036.958 kb on - strandat 3036.958 kb on - strandat 3036.958 kb on - strandat 3036.958 kb on - strandat 3036.991 kb on - strandat 3036.997 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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3,033,787 - AO353_13660 0.23 +1.1
3,033,787 - AO353_13660 0.23 -0.1
3,033,787 - AO353_13660 0.23 +0.6
3,033,787 - AO353_13660 0.23 +1.6
3,033,787 - AO353_13660 0.23 -0.7
3,033,840 - AO353_13660 0.28 +0.5
3,033,840 - AO353_13660 0.28 +0.6
3,033,840 - AO353_13660 0.28 +0.3
3,033,840 - AO353_13660 0.28 -0.6
3,033,840 - AO353_13660 0.28 +1.7
3,033,840 - AO353_13660 0.28 +0.1
3,033,840 - AO353_13660 0.28 -0.3
3,033,840 - AO353_13660 0.28 +1.1
3,033,890 - AO353_13660 0.33 -0.1
3,034,011 - AO353_13660 0.45 +1.4
3,034,011 - AO353_13660 0.45 +0.6
3,034,011 - AO353_13660 0.45 +0.9
3,034,029 - AO353_13660 0.47 +0.6
3,034,029 - AO353_13660 0.47 +0.0
3,034,029 - AO353_13660 0.47 +0.8
3,034,273 - AO353_13660 0.71 -0.7
3,034,273 - AO353_13660 0.71 -0.3
3,034,448 - AO353_13660 0.88 +0.6
3,034,448 - AO353_13660 0.88 +0.3
3,034,448 - AO353_13660 0.88 +0.1
3,034,448 - AO353_13660 0.88 -0.6
3,034,540 - -0.4
3,034,540 - +0.0
3,034,540 - +1.2
3,034,540 - +0.4
3,034,540 - +1.3
3,034,540 - +0.0
3,034,540 - -0.5
3,034,540 - +1.0
3,034,540 - +0.3
3,034,540 - -0.4
3,034,540 - +0.7
3,034,540 - +0.8
3,034,540 - -0.0
3,034,540 - -0.1
3,034,540 - +1.3
3,034,540 - +1.2
3,034,540 - -0.0
3,034,540 - +0.0
3,034,540 - +0.3
3,034,540 - -0.1
3,034,540 - +0.2
3,034,540 - +0.3
3,034,540 - +0.4
3,034,540 - +1.3
3,034,540 - -1.0
3,034,540 - +2.0
3,034,540 - +0.5
3,034,540 - +0.9
3,034,540 - -0.1
3,034,540 - +0.8
3,034,540 - +0.5
3,034,540 - +0.2
3,034,540 - +0.0
3,034,540 - +1.0
3,034,542 - +0.2
3,034,567 - +2.6
3,034,567 - -0.7
3,034,567 - -0.2
3,034,659 + -0.1
3,034,674 + -0.2
3,034,674 + -1.3
3,034,674 + +0.7
3,034,675 - -0.0
3,034,675 - -0.4
3,034,675 - +2.0
3,034,675 - -0.1
3,034,675 - -0.6
3,034,675 - +1.7
3,034,675 - +0.3
3,034,682 + -1.0
3,034,683 - -0.9
3,034,683 - +0.9
3,034,683 - +1.2
3,034,683 - +0.9
3,034,683 - +0.9
3,034,792 + -2.4
3,034,792 + -1.4
3,034,792 + -0.2
3,034,793 - -1.9
3,034,793 - +0.0
3,034,891 + AO353_13665 0.10 -0.1
3,034,891 + AO353_13665 0.10 -0.7
3,034,892 - AO353_13665 0.10 -0.6
3,034,993 + AO353_13665 0.18 -1.3
3,034,993 + AO353_13665 0.18 -1.6
3,034,994 - AO353_13665 0.18 -1.2
3,034,994 - AO353_13665 0.18 -0.1
3,034,994 - AO353_13665 0.18 -1.1
3,034,994 - AO353_13665 0.18 +0.2
3,035,010 + AO353_13665 0.19 -0.6
3,035,010 + AO353_13665 0.19 +0.0
3,035,011 - AO353_13665 0.20 +0.6
3,035,171 - AO353_13665 0.32 -0.9
3,035,171 - AO353_13665 0.32 +0.9
3,035,179 + AO353_13665 0.33 -1.3
3,035,179 + AO353_13665 0.33 +0.3
3,035,179 + AO353_13665 0.33 -0.4
3,035,179 + AO353_13665 0.33 +0.3
3,035,179 + AO353_13665 0.33 +0.6
3,035,180 - AO353_13665 0.33 -1.4
3,035,180 - AO353_13665 0.33 -0.8
3,035,180 - AO353_13665 0.33 -0.8
3,035,180 - AO353_13665 0.33 -2.1
3,035,180 - AO353_13665 0.33 -0.4
3,035,829 - AO353_13665 0.84 +0.3
3,035,829 - AO353_13665 0.84 -1.3
3,035,865 - AO353_13665 0.87 -1.4
3,036,041 + +0.2
3,036,041 + -1.3
3,036,041 + -1.6
3,036,130 + -0.5
3,036,130 + +2.0
3,036,130 + +0.3
3,036,131 - +0.9
3,036,131 - +1.4
3,036,131 - +0.5
3,036,131 - +1.2
3,036,261 + AO353_13670 0.23 +0.3
3,036,261 + AO353_13670 0.23 +0.9
3,036,262 - AO353_13670 0.23 -1.2
3,036,298 + AO353_13670 0.27 +0.8
3,036,299 - AO353_13670 0.28 +0.2
3,036,299 - AO353_13670 0.28 -0.1
3,036,299 - AO353_13670 0.28 -0.3
3,036,299 - AO353_13670 0.28 +0.7
3,036,299 - AO353_13670 0.28 +0.7
3,036,453 + AO353_13670 0.45 -0.7
3,036,453 + AO353_13670 0.45 +0.6
3,036,453 + AO353_13670 0.45 -0.4
3,036,454 - AO353_13670 0.45 +0.3
3,036,883 + -1.9
3,036,883 + -1.7
3,036,883 + +0.1
3,036,884 - +0.0
3,036,884 - +1.9
3,036,884 - -1.0
3,036,957 + -2.6
3,036,957 + -0.8
3,036,958 - +0.4
3,036,958 - +1.6
3,036,958 - -1.6
3,036,958 - -0.2
3,036,991 - +0.1
3,036,997 - -0.6

Or see this region's nucleotide sequence