Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07925 and AO353_07930 are separated by 101 nucleotides AO353_07930 and AO353_07935 are separated by 294 nucleotides AO353_07935 and AO353_07940 are separated by 59 nucleotides AO353_07940 and AO353_07945 are separated by 34 nucleotides
AO353_07925: AO353_07925 - beta-hydroxylase, at 1,747,803 to 1,748,627
_07925
AO353_07930: AO353_07930 - fructose-1,6-bisphosphate aldolase, at 1,748,729 to 1,749,793
_07930
AO353_07935: AO353_07935 - hypothetical protein, at 1,750,088 to 1,750,420
_07935
AO353_07940: AO353_07940 - hypothetical protein, at 1,750,480 to 1,750,701
_07940
AO353_07945: AO353_07945 - phosphoglycerate kinase, at 1,750,736 to 1,751,899
_07945
Position (kb)
1748
1749
1750 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1747.741 kb on - strand at 1747.743 kb on + strand at 1747.743 kb on + strand at 1747.755 kb on - strand at 1747.848 kb on - strand at 1747.869 kb on - strand at 1747.869 kb on - strand at 1747.929 kb on + strand, within AO353_07925 at 1747.929 kb on + strand, within AO353_07925 at 1747.985 kb on - strand, within AO353_07925 at 1748.000 kb on + strand, within AO353_07925 at 1748.064 kb on + strand, within AO353_07925 at 1748.109 kb on + strand, within AO353_07925 at 1748.208 kb on + strand, within AO353_07925 at 1748.209 kb on - strand, within AO353_07925 at 1748.265 kb on + strand, within AO353_07925 at 1748.265 kb on + strand, within AO353_07925 at 1748.266 kb on - strand, within AO353_07925 at 1748.266 kb on - strand, within AO353_07925 at 1748.267 kb on + strand, within AO353_07925 at 1748.267 kb on + strand, within AO353_07925 at 1748.267 kb on + strand, within AO353_07925 at 1748.267 kb on + strand, within AO353_07925 at 1748.267 kb on + strand, within AO353_07925 at 1748.267 kb on + strand, within AO353_07925 at 1748.267 kb on + strand, within AO353_07925 at 1748.267 kb on + strand, within AO353_07925 at 1748.267 kb on + strand, within AO353_07925 at 1748.267 kb on + strand, within AO353_07925 at 1748.268 kb on - strand, within AO353_07925 at 1748.268 kb on - strand, within AO353_07925 at 1748.268 kb on - strand, within AO353_07925 at 1748.268 kb on - strand, within AO353_07925 at 1748.268 kb on - strand, within AO353_07925 at 1748.268 kb on - strand, within AO353_07925 at 1748.269 kb on + strand, within AO353_07925 at 1748.269 kb on + strand, within AO353_07925 at 1748.269 kb on + strand, within AO353_07925 at 1748.269 kb on + strand, within AO353_07925 at 1748.270 kb on - strand, within AO353_07925 at 1748.343 kb on + strand, within AO353_07925 at 1748.343 kb on + strand, within AO353_07925 at 1748.343 kb on + strand, within AO353_07925 at 1748.344 kb on - strand, within AO353_07925 at 1748.356 kb on - strand, within AO353_07925 at 1748.356 kb on - strand, within AO353_07925 at 1748.391 kb on + strand, within AO353_07925 at 1748.391 kb on + strand, within AO353_07925 at 1748.391 kb on + strand, within AO353_07925 at 1748.391 kb on + strand, within AO353_07925 at 1748.392 kb on - strand, within AO353_07925 at 1748.392 kb on - strand, within AO353_07925 at 1748.392 kb on - strand, within AO353_07925 at 1748.418 kb on + strand, within AO353_07925 at 1748.419 kb on - strand, within AO353_07925 at 1748.515 kb on + strand, within AO353_07925 at 1748.515 kb on + strand, within AO353_07925 at 1748.515 kb on + strand, within AO353_07925 at 1748.515 kb on + strand, within AO353_07925 at 1748.515 kb on + strand, within AO353_07925 at 1748.515 kb on + strand, within AO353_07925 at 1748.516 kb on - strand, within AO353_07925 at 1748.516 kb on - strand, within AO353_07925 at 1748.516 kb on - strand, within AO353_07925 at 1748.516 kb on - strand, within AO353_07925 at 1748.541 kb on - strand, within AO353_07925 at 1748.619 kb on - strand at 1748.626 kb on - strand at 1748.626 kb on - strand at 1748.653 kb on + strand at 1748.730 kb on + strand at 1748.730 kb on + strand at 1748.731 kb on - strand at 1749.856 kb on - strand at 1749.864 kb on + strand at 1749.865 kb on - strand at 1749.865 kb on - strand at 1749.903 kb on - strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.909 kb on + strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.910 kb on - strand at 1749.923 kb on + strand at 1749.923 kb on + strand at 1749.977 kb on + strand at 1749.977 kb on + strand at 1750.089 kb on + strand at 1750.089 kb on + strand at 1750.089 kb on + strand at 1750.089 kb on + strand at 1750.090 kb on - strand at 1750.090 kb on - strand at 1750.090 kb on - strand at 1750.090 kb on - strand at 1750.090 kb on - strand at 1750.099 kb on + strand at 1750.100 kb on - strand at 1750.160 kb on + strand, within AO353_07935 at 1750.188 kb on + strand, within AO353_07935 at 1750.189 kb on - strand, within AO353_07935 at 1750.331 kb on - strand, within AO353_07935 at 1750.366 kb on + strand, within AO353_07935 at 1750.366 kb on + strand, within AO353_07935 at 1750.385 kb on + strand, within AO353_07935 at 1750.385 kb on + strand, within AO353_07935 at 1750.385 kb on + strand, within AO353_07935 at 1750.385 kb on + strand, within AO353_07935 at 1750.386 kb on - strand, within AO353_07935 at 1750.386 kb on - strand, within AO353_07935 at 1750.386 kb on - strand, within AO353_07935 at 1750.386 kb on - strand, within AO353_07935 at 1750.406 kb on + strand at 1750.520 kb on + strand, within AO353_07940 at 1750.521 kb on - strand, within AO353_07940 at 1750.521 kb on - strand, within AO353_07940 at 1750.521 kb on - strand, within AO353_07940 at 1750.524 kb on + strand, within AO353_07940 at 1750.524 kb on + strand, within AO353_07940 at 1750.592 kb on + strand, within AO353_07940 at 1750.663 kb on + strand, within AO353_07940 at 1750.663 kb on + strand, within AO353_07940 at 1750.663 kb on + strand, within AO353_07940 at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.703 kb on + strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.704 kb on - strand at 1750.737 kb on + strand at 1750.737 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,747,741 - -0.1 1,747,743 + -0.3 1,747,743 + -0.4 1,747,755 - -0.4 1,747,848 - -0.3 1,747,869 - -0.1 1,747,869 - -1.7 1,747,929 + AO353_07925 0.15 +0.4 1,747,929 + AO353_07925 0.15 +0.3 1,747,985 - AO353_07925 0.22 +0.7 1,748,000 + AO353_07925 0.24 +0.2 1,748,064 + AO353_07925 0.32 +0.1 1,748,109 + AO353_07925 0.37 +1.3 1,748,208 + AO353_07925 0.49 +0.1 1,748,209 - AO353_07925 0.49 +0.2 1,748,265 + AO353_07925 0.56 -0.5 1,748,265 + AO353_07925 0.56 +0.3 1,748,266 - AO353_07925 0.56 +0.3 1,748,266 - AO353_07925 0.56 +0.1 1,748,267 + AO353_07925 0.56 +1.0 1,748,267 + AO353_07925 0.56 -0.0 1,748,267 + AO353_07925 0.56 +0.3 1,748,267 + AO353_07925 0.56 -2.2 1,748,267 + AO353_07925 0.56 +0.2 1,748,267 + AO353_07925 0.56 +1.7 1,748,267 + AO353_07925 0.56 -1.9 1,748,267 + AO353_07925 0.56 +1.4 1,748,267 + AO353_07925 0.56 -0.1 1,748,267 + AO353_07925 0.56 -0.4 1,748,268 - AO353_07925 0.56 +0.4 1,748,268 - AO353_07925 0.56 +1.0 1,748,268 - AO353_07925 0.56 +0.4 1,748,268 - AO353_07925 0.56 -0.9 1,748,268 - AO353_07925 0.56 -1.4 1,748,268 - AO353_07925 0.56 +0.1 1,748,269 + AO353_07925 0.56 +0.7 1,748,269 + AO353_07925 0.56 -1.6 1,748,269 + AO353_07925 0.56 -0.1 1,748,269 + AO353_07925 0.56 -0.8 1,748,270 - AO353_07925 0.57 +0.1 1,748,343 + AO353_07925 0.65 +0.9 1,748,343 + AO353_07925 0.65 -0.2 1,748,343 + AO353_07925 0.65 +1.0 1,748,344 - AO353_07925 0.66 -0.1 1,748,356 - AO353_07925 0.67 +0.3 1,748,356 - AO353_07925 0.67 +1.3 1,748,391 + AO353_07925 0.71 -0.3 1,748,391 + AO353_07925 0.71 +1.7 1,748,391 + AO353_07925 0.71 -1.3 1,748,391 + AO353_07925 0.71 -0.3 1,748,392 - AO353_07925 0.71 -1.4 1,748,392 - AO353_07925 0.71 +0.2 1,748,392 - AO353_07925 0.71 +0.9 1,748,418 + AO353_07925 0.75 +1.7 1,748,419 - AO353_07925 0.75 -1.4 1,748,515 + AO353_07925 0.86 -1.9 1,748,515 + AO353_07925 0.86 +0.4 1,748,515 + AO353_07925 0.86 +0.2 1,748,515 + AO353_07925 0.86 -0.6 1,748,515 + AO353_07925 0.86 +0.2 1,748,515 + AO353_07925 0.86 +0.3 1,748,516 - AO353_07925 0.86 -2.1 1,748,516 - AO353_07925 0.86 -0.2 1,748,516 - AO353_07925 0.86 +0.3 1,748,516 - AO353_07925 0.86 +1.5 1,748,541 - AO353_07925 0.89 +1.0 1,748,619 - +0.3 1,748,626 - +0.0 1,748,626 - +0.1 1,748,653 + -0.9 1,748,730 + +0.7 1,748,730 + -0.1 1,748,731 - +0.0 1,749,856 - -1.0 1,749,864 + -0.4 1,749,865 - -2.8 1,749,865 - -0.8 1,749,903 - +0.3 1,749,909 + +2.1 1,749,909 + +0.1 1,749,909 + +0.7 1,749,909 + -1.1 1,749,909 + -0.9 1,749,909 + +1.1 1,749,909 + -0.7 1,749,909 + +0.1 1,749,909 + -1.3 1,749,909 + -0.0 1,749,909 + -0.7 1,749,909 + +0.1 1,749,909 + -1.6 1,749,909 + +1.1 1,749,909 + -1.4 1,749,909 + +0.3 1,749,909 + -0.6 1,749,910 - -0.2 1,749,910 - +2.3 1,749,910 - -0.3 1,749,910 - +0.5 1,749,910 - -1.7 1,749,910 - -0.5 1,749,910 - +0.1 1,749,910 - -1.3 1,749,910 - -0.0 1,749,910 - +0.9 1,749,910 - +0.6 1,749,910 - +0.1 1,749,910 - +0.3 1,749,910 - +0.1 1,749,923 + +1.2 1,749,923 + +0.1 1,749,977 + +0.3 1,749,977 + +0.7 1,750,089 + -1.1 1,750,089 + -0.1 1,750,089 + +0.0 1,750,089 + -0.9 1,750,090 - +1.0 1,750,090 - +0.1 1,750,090 - -0.3 1,750,090 - +0.2 1,750,090 - +0.2 1,750,099 + -0.9 1,750,100 - -1.1 1,750,160 + AO353_07935 0.22 -2.5 1,750,188 + AO353_07935 0.30 -0.1 1,750,189 - AO353_07935 0.30 -0.8 1,750,331 - AO353_07935 0.73 +1.1 1,750,366 + AO353_07935 0.83 +1.1 1,750,366 + AO353_07935 0.83 -1.7 1,750,385 + AO353_07935 0.89 +0.5 1,750,385 + AO353_07935 0.89 -0.9 1,750,385 + AO353_07935 0.89 -1.4 1,750,385 + AO353_07935 0.89 +0.7 1,750,386 - AO353_07935 0.89 -0.6 1,750,386 - AO353_07935 0.89 -0.9 1,750,386 - AO353_07935 0.89 -0.4 1,750,386 - AO353_07935 0.89 -0.5 1,750,406 + +0.4 1,750,520 + AO353_07940 0.18 -1.4 1,750,521 - AO353_07940 0.18 -0.4 1,750,521 - AO353_07940 0.18 -0.2 1,750,521 - AO353_07940 0.18 +0.4 1,750,524 + AO353_07940 0.20 -1.1 1,750,524 + AO353_07940 0.20 +0.1 1,750,592 + AO353_07940 0.50 -0.0 1,750,663 + AO353_07940 0.82 +0.5 1,750,663 + AO353_07940 0.82 -0.9 1,750,663 + AO353_07940 0.82 -0.4 1,750,703 + +0.4 1,750,703 + -0.8 1,750,703 + -1.9 1,750,703 + -0.6 1,750,703 + +1.7 1,750,703 + +0.1 1,750,703 + -0.6 1,750,703 + -0.2 1,750,703 + -0.2 1,750,703 + +0.3 1,750,703 + -0.3 1,750,703 + -0.9 1,750,703 + -0.4 1,750,703 + +0.7 1,750,704 - -2.3 1,750,704 - -1.3 1,750,704 - +0.6 1,750,704 - -1.0 1,750,704 - -0.6 1,750,704 - -0.1 1,750,704 - -1.7 1,750,704 - +0.8 1,750,704 - -0.3 1,750,704 - -1.1 1,750,704 - -0.1 1,750,704 - -0.5 1,750,704 - -1.4 1,750,704 - -1.2 1,750,704 - -1.0 1,750,704 - +0.6 1,750,737 + -0.5 1,750,737 + -2.0
Or see this region's nucleotide sequence