Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07700 and AO353_07705 overlap by 1 nucleotides AO353_07705 and AO353_07710 are separated by 210 nucleotides
AO353_07700: AO353_07700 - electron transfer flavoprotein subunit alpha, at 1,695,610 to 1,696,830
_07700
AO353_07705: AO353_07705 - DgcB Dimethylglycine demethylase subunit B (EC 1.5.3.-) (from data) , at 1,696,830 to 1,698,779
_07705
AO353_07710: AO353_07710 - DgcA Dimethylglycine demethylase subunit A (from data) , at 1,698,990 to 1,701,050
_07710
Position (kb)
1696
1697
1698
1699 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1696.562 kb on + strand, within AO353_07700 at 1696.562 kb on + strand, within AO353_07700 at 1696.562 kb on + strand, within AO353_07700 at 1696.562 kb on + strand, within AO353_07700 at 1696.562 kb on + strand, within AO353_07700 at 1696.562 kb on + strand, within AO353_07700 at 1696.563 kb on - strand, within AO353_07700 at 1696.563 kb on - strand, within AO353_07700 at 1696.563 kb on - strand, within AO353_07700 at 1696.819 kb on - strand at 1697.154 kb on + strand, within AO353_07705 at 1697.154 kb on + strand, within AO353_07705 at 1697.173 kb on + strand, within AO353_07705 at 1697.174 kb on - strand, within AO353_07705 at 1697.185 kb on + strand, within AO353_07705 at 1697.185 kb on + strand, within AO353_07705 at 1697.186 kb on - strand, within AO353_07705 at 1697.197 kb on + strand, within AO353_07705 at 1697.198 kb on - strand, within AO353_07705 at 1697.198 kb on - strand, within AO353_07705 at 1697.212 kb on + strand, within AO353_07705 at 1697.212 kb on + strand, within AO353_07705 at 1697.212 kb on + strand, within AO353_07705 at 1697.213 kb on - strand, within AO353_07705 at 1697.213 kb on - strand, within AO353_07705 at 1697.213 kb on - strand, within AO353_07705 at 1697.213 kb on - strand, within AO353_07705 at 1697.213 kb on - strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.278 kb on + strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.279 kb on - strand, within AO353_07705 at 1697.302 kb on + strand, within AO353_07705 at 1697.302 kb on + strand, within AO353_07705 at 1697.302 kb on + strand, within AO353_07705 at 1697.302 kb on + strand, within AO353_07705 at 1697.303 kb on - strand, within AO353_07705 at 1697.303 kb on - strand, within AO353_07705 at 1697.303 kb on - strand, within AO353_07705 at 1697.323 kb on + strand, within AO353_07705 at 1697.323 kb on + strand, within AO353_07705 at 1697.324 kb on - strand, within AO353_07705 at 1697.383 kb on + strand, within AO353_07705 at 1697.383 kb on + strand, within AO353_07705 at 1697.384 kb on - strand, within AO353_07705 at 1697.384 kb on - strand, within AO353_07705 at 1697.384 kb on - strand, within AO353_07705 at 1697.384 kb on - strand, within AO353_07705 at 1697.384 kb on - strand, within AO353_07705 at 1697.384 kb on - strand, within AO353_07705 at 1697.384 kb on - strand, within AO353_07705 at 1697.897 kb on + strand, within AO353_07705 at 1697.897 kb on + strand, within AO353_07705 at 1697.903 kb on + strand, within AO353_07705 at 1697.903 kb on + strand, within AO353_07705 at 1697.903 kb on + strand, within AO353_07705 at 1697.903 kb on + strand, within AO353_07705 at 1698.033 kb on - strand, within AO353_07705 at 1698.078 kb on - strand, within AO353_07705 at 1698.146 kb on + strand, within AO353_07705 at 1698.146 kb on + strand, within AO353_07705 at 1698.146 kb on + strand, within AO353_07705 at 1698.146 kb on + strand, within AO353_07705 at 1698.146 kb on + strand, within AO353_07705 at 1698.147 kb on - strand, within AO353_07705 at 1698.147 kb on - strand, within AO353_07705 at 1698.147 kb on - strand, within AO353_07705 at 1698.147 kb on - strand, within AO353_07705 at 1698.147 kb on - strand, within AO353_07705 at 1698.442 kb on + strand, within AO353_07705 at 1698.443 kb on - strand, within AO353_07705 at 1698.443 kb on - strand, within AO353_07705 at 1698.443 kb on - strand, within AO353_07705 at 1698.510 kb on - strand, within AO353_07705 at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.595 kb on + strand at 1698.596 kb on - strand at 1698.596 kb on - strand at 1698.596 kb on - strand at 1698.596 kb on - strand at 1698.596 kb on - strand at 1698.596 kb on - strand at 1698.596 kb on - strand at 1698.596 kb on - strand at 1698.596 kb on - strand at 1698.596 kb on - strand at 1698.612 kb on + strand at 1698.612 kb on + strand at 1698.612 kb on + strand at 1698.612 kb on + strand at 1698.612 kb on + strand at 1698.613 kb on - strand at 1698.634 kb on + strand at 1698.634 kb on + strand at 1698.634 kb on + strand at 1698.634 kb on + strand at 1698.635 kb on - strand at 1698.635 kb on - strand at 1698.775 kb on - strand at 1698.836 kb on - strand at 1698.836 kb on - strand at 1698.836 kb on - strand at 1698.836 kb on - strand at 1698.836 kb on - strand at 1698.836 kb on - strand at 1698.836 kb on - strand at 1698.898 kb on + strand at 1698.898 kb on + strand at 1698.898 kb on + strand at 1698.898 kb on + strand at 1698.899 kb on - strand at 1698.899 kb on - strand at 1698.899 kb on - strand at 1698.899 kb on - strand at 1698.899 kb on - strand at 1698.899 kb on - strand at 1698.899 kb on - strand at 1698.907 kb on + strand at 1698.907 kb on + strand at 1698.907 kb on + strand at 1698.907 kb on + strand at 1698.907 kb on + strand at 1698.907 kb on + strand at 1698.907 kb on + strand at 1698.908 kb on - strand at 1698.908 kb on - strand at 1698.908 kb on - strand at 1698.908 kb on - strand at 1698.908 kb on - strand at 1698.908 kb on - strand at 1698.908 kb on - strand at 1698.908 kb on - strand at 1698.982 kb on + strand at 1698.982 kb on + strand at 1698.982 kb on + strand at 1698.982 kb on + strand at 1698.983 kb on - strand at 1698.983 kb on - strand at 1698.983 kb on - strand at 1698.983 kb on - strand at 1698.983 kb on - strand at 1698.983 kb on - strand at 1699.021 kb on + strand at 1699.021 kb on + strand at 1699.022 kb on - strand at 1699.041 kb on - strand at 1699.041 kb on - strand at 1699.178 kb on - strand at 1699.180 kb on + strand at 1699.180 kb on + strand at 1699.181 kb on - strand at 1699.255 kb on + strand, within AO353_07710 at 1699.297 kb on + strand, within AO353_07710 at 1699.345 kb on + strand, within AO353_07710 at 1699.360 kb on + strand, within AO353_07710 at 1699.360 kb on + strand, within AO353_07710 at 1699.360 kb on + strand, within AO353_07710 at 1699.360 kb on + strand, within AO353_07710 at 1699.360 kb on + strand, within AO353_07710 at 1699.360 kb on + strand, within AO353_07710 at 1699.360 kb on + strand, within AO353_07710 at 1699.360 kb on + strand, within AO353_07710 at 1699.360 kb on + strand, within AO353_07710 at 1699.361 kb on - strand, within AO353_07710 at 1699.361 kb on - strand, within AO353_07710 at 1699.361 kb on - strand, within AO353_07710 at 1699.361 kb on - strand, within AO353_07710 at 1699.376 kb on + strand, within AO353_07710 at 1699.377 kb on - strand, within AO353_07710 at 1699.377 kb on - strand, within AO353_07710 at 1699.377 kb on - strand, within AO353_07710 at 1699.447 kb on + strand, within AO353_07710 at 1699.447 kb on + strand, within AO353_07710 at 1699.448 kb on - strand, within AO353_07710 at 1699.448 kb on - strand, within AO353_07710 at 1699.448 kb on - strand, within AO353_07710 at 1699.489 kb on + strand, within AO353_07710 at 1699.489 kb on + strand, within AO353_07710 at 1699.489 kb on + strand, within AO353_07710 at 1699.489 kb on + strand, within AO353_07710 at 1699.490 kb on - strand, within AO353_07710 at 1699.490 kb on - strand, within AO353_07710 at 1699.490 kb on - strand, within AO353_07710 at 1699.760 kb on + strand, within AO353_07710
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,696,562 + AO353_07700 0.78 -3.2 1,696,562 + AO353_07700 0.78 -0.9 1,696,562 + AO353_07700 0.78 -0.2 1,696,562 + AO353_07700 0.78 +2.0 1,696,562 + AO353_07700 0.78 -0.4 1,696,562 + AO353_07700 0.78 +0.9 1,696,563 - AO353_07700 0.78 +0.5 1,696,563 - AO353_07700 0.78 -0.7 1,696,563 - AO353_07700 0.78 +0.3 1,696,819 - +0.3 1,697,154 + AO353_07705 0.17 -0.3 1,697,154 + AO353_07705 0.17 -0.7 1,697,173 + AO353_07705 0.18 -0.2 1,697,174 - AO353_07705 0.18 +0.4 1,697,185 + AO353_07705 0.18 +0.1 1,697,185 + AO353_07705 0.18 +0.7 1,697,186 - AO353_07705 0.18 +0.3 1,697,197 + AO353_07705 0.19 -0.1 1,697,198 - AO353_07705 0.19 +0.1 1,697,198 - AO353_07705 0.19 -0.3 1,697,212 + AO353_07705 0.20 -0.9 1,697,212 + AO353_07705 0.20 +0.5 1,697,212 + AO353_07705 0.20 -0.7 1,697,213 - AO353_07705 0.20 -0.9 1,697,213 - AO353_07705 0.20 -0.4 1,697,213 - AO353_07705 0.20 -1.6 1,697,213 - AO353_07705 0.20 +0.0 1,697,213 - AO353_07705 0.20 -1.0 1,697,278 + AO353_07705 0.23 +0.3 1,697,278 + AO353_07705 0.23 -0.6 1,697,278 + AO353_07705 0.23 +0.1 1,697,278 + AO353_07705 0.23 +0.1 1,697,278 + AO353_07705 0.23 +0.4 1,697,278 + AO353_07705 0.23 +0.6 1,697,278 + AO353_07705 0.23 +0.5 1,697,278 + AO353_07705 0.23 +0.0 1,697,278 + AO353_07705 0.23 +0.1 1,697,278 + AO353_07705 0.23 -0.4 1,697,278 + AO353_07705 0.23 -0.5 1,697,278 + AO353_07705 0.23 -0.1 1,697,278 + AO353_07705 0.23 +0.1 1,697,279 - AO353_07705 0.23 +0.9 1,697,279 - AO353_07705 0.23 +0.9 1,697,279 - AO353_07705 0.23 -0.4 1,697,279 - AO353_07705 0.23 -0.3 1,697,279 - AO353_07705 0.23 +0.7 1,697,279 - AO353_07705 0.23 -1.6 1,697,279 - AO353_07705 0.23 +1.4 1,697,279 - AO353_07705 0.23 +0.0 1,697,279 - AO353_07705 0.23 -0.4 1,697,279 - AO353_07705 0.23 -0.9 1,697,279 - AO353_07705 0.23 -0.9 1,697,302 + AO353_07705 0.24 +0.5 1,697,302 + AO353_07705 0.24 +0.7 1,697,302 + AO353_07705 0.24 +1.0 1,697,302 + AO353_07705 0.24 +0.3 1,697,303 - AO353_07705 0.24 +1.7 1,697,303 - AO353_07705 0.24 -0.0 1,697,303 - AO353_07705 0.24 +0.3 1,697,323 + AO353_07705 0.25 +0.7 1,697,323 + AO353_07705 0.25 -0.6 1,697,324 - AO353_07705 0.25 -0.2 1,697,383 + AO353_07705 0.28 +0.4 1,697,383 + AO353_07705 0.28 +0.5 1,697,384 - AO353_07705 0.28 -0.6 1,697,384 - AO353_07705 0.28 -0.1 1,697,384 - AO353_07705 0.28 +0.0 1,697,384 - AO353_07705 0.28 +1.4 1,697,384 - AO353_07705 0.28 -0.9 1,697,384 - AO353_07705 0.28 +2.1 1,697,384 - AO353_07705 0.28 -0.5 1,697,897 + AO353_07705 0.55 +0.5 1,697,897 + AO353_07705 0.55 -0.6 1,697,903 + AO353_07705 0.55 -1.0 1,697,903 + AO353_07705 0.55 -0.7 1,697,903 + AO353_07705 0.55 -0.1 1,697,903 + AO353_07705 0.55 +0.3 1,698,033 - AO353_07705 0.62 -0.4 1,698,078 - AO353_07705 0.64 +1.7 1,698,146 + AO353_07705 0.67 +0.3 1,698,146 + AO353_07705 0.67 +0.1 1,698,146 + AO353_07705 0.67 +0.8 1,698,146 + AO353_07705 0.67 -0.4 1,698,146 + AO353_07705 0.67 -0.2 1,698,147 - AO353_07705 0.68 +0.4 1,698,147 - AO353_07705 0.68 +1.7 1,698,147 - AO353_07705 0.68 +0.4 1,698,147 - AO353_07705 0.68 +0.8 1,698,147 - AO353_07705 0.68 +0.3 1,698,442 + AO353_07705 0.83 +0.4 1,698,443 - AO353_07705 0.83 -0.7 1,698,443 - AO353_07705 0.83 +0.1 1,698,443 - AO353_07705 0.83 -0.1 1,698,510 - AO353_07705 0.86 -1.2 1,698,595 + -0.9 1,698,595 + +0.8 1,698,595 + -0.3 1,698,595 + -1.9 1,698,595 + -0.9 1,698,595 + -0.3 1,698,595 + +0.7 1,698,595 + +0.1 1,698,595 + -1.3 1,698,595 + -0.3 1,698,595 + +0.5 1,698,595 + -0.6 1,698,595 + +1.5 1,698,595 + -0.0 1,698,596 - -0.3 1,698,596 - +2.3 1,698,596 - -0.2 1,698,596 - -0.0 1,698,596 - -0.7 1,698,596 - -0.7 1,698,596 - -1.4 1,698,596 - +0.2 1,698,596 - -0.8 1,698,596 - +0.5 1,698,612 + -0.7 1,698,612 + -1.5 1,698,612 + -1.8 1,698,612 + +0.5 1,698,612 + +1.0 1,698,613 - -0.1 1,698,634 + +0.4 1,698,634 + +0.1 1,698,634 + -1.3 1,698,634 + -0.3 1,698,635 - +2.2 1,698,635 - +0.8 1,698,775 - +0.1 1,698,836 - +0.4 1,698,836 - +1.1 1,698,836 - +0.5 1,698,836 - +1.3 1,698,836 - +0.3 1,698,836 - +0.7 1,698,836 - -0.6 1,698,898 + +0.9 1,698,898 + -0.4 1,698,898 + -0.9 1,698,898 + +0.1 1,698,899 - -0.3 1,698,899 - +2.1 1,698,899 - -0.7 1,698,899 - -0.2 1,698,899 - +0.2 1,698,899 - -1.1 1,698,899 - -0.7 1,698,907 + -1.3 1,698,907 + +0.5 1,698,907 + -0.5 1,698,907 + +0.3 1,698,907 + -0.2 1,698,907 + -0.3 1,698,907 + +0.4 1,698,908 - -0.3 1,698,908 - +0.5 1,698,908 - +0.7 1,698,908 - -0.5 1,698,908 - -0.3 1,698,908 - +0.1 1,698,908 - +0.2 1,698,908 - +2.3 1,698,982 + +0.1 1,698,982 + -0.3 1,698,982 + +0.8 1,698,982 + -0.9 1,698,983 - +0.7 1,698,983 - -0.6 1,698,983 - +0.6 1,698,983 - +0.7 1,698,983 - +0.1 1,698,983 - +0.2 1,699,021 + +0.7 1,699,021 + -0.4 1,699,022 - -1.3 1,699,041 - +0.4 1,699,041 - -0.3 1,699,178 - -2.2 1,699,180 + +0.5 1,699,180 + -0.5 1,699,181 - -0.5 1,699,255 + AO353_07710 0.13 +0.3 1,699,297 + AO353_07710 0.15 -1.5 1,699,345 + AO353_07710 0.17 -0.5 1,699,360 + AO353_07710 0.18 +0.0 1,699,360 + AO353_07710 0.18 -0.5 1,699,360 + AO353_07710 0.18 +0.3 1,699,360 + AO353_07710 0.18 +0.5 1,699,360 + AO353_07710 0.18 +0.8 1,699,360 + AO353_07710 0.18 -1.6 1,699,360 + AO353_07710 0.18 +0.8 1,699,360 + AO353_07710 0.18 -1.3 1,699,360 + AO353_07710 0.18 +0.5 1,699,361 - AO353_07710 0.18 +0.9 1,699,361 - AO353_07710 0.18 -0.3 1,699,361 - AO353_07710 0.18 -0.1 1,699,361 - AO353_07710 0.18 +0.8 1,699,376 + AO353_07710 0.19 -0.8 1,699,377 - AO353_07710 0.19 -0.1 1,699,377 - AO353_07710 0.19 +0.2 1,699,377 - AO353_07710 0.19 -0.7 1,699,447 + AO353_07710 0.22 -0.4 1,699,447 + AO353_07710 0.22 -0.9 1,699,448 - AO353_07710 0.22 -1.6 1,699,448 - AO353_07710 0.22 +0.6 1,699,448 - AO353_07710 0.22 +0.2 1,699,489 + AO353_07710 0.24 -0.9 1,699,489 + AO353_07710 0.24 +1.2 1,699,489 + AO353_07710 0.24 -0.7 1,699,489 + AO353_07710 0.24 -0.7 1,699,490 - AO353_07710 0.24 +0.1 1,699,490 - AO353_07710 0.24 -1.3 1,699,490 - AO353_07710 0.24 +0.7 1,699,760 + AO353_07710 0.37 -0.0
Or see this region's nucleotide sequence