Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04185 and AO353_04190 are separated by 336 nucleotides AO353_04190 and AO353_04195 are separated by 75 nucleotides
AO353_04185: AO353_04185 - DeoR family transcriptional regulator, at 897,284 to 898,039
_04185
AO353_04190: AO353_04190 - glycerol-3-phosphate dehydrogenase, at 898,376 to 899,914
_04190
AO353_04195: AO353_04195 - hypothetical protein, at 899,990 to 901,267
_04195
Position (kb)
898
899
900 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 897.376 kb on + strand, within AO353_04185 at 897.376 kb on + strand, within AO353_04185 at 897.377 kb on - strand, within AO353_04185 at 897.377 kb on - strand, within AO353_04185 at 897.377 kb on - strand, within AO353_04185 at 897.400 kb on + strand, within AO353_04185 at 897.401 kb on - strand, within AO353_04185 at 897.455 kb on + strand, within AO353_04185 at 897.482 kb on + strand, within AO353_04185 at 897.482 kb on + strand, within AO353_04185 at 897.647 kb on - strand, within AO353_04185 at 897.846 kb on + strand, within AO353_04185 at 897.847 kb on - strand, within AO353_04185 at 897.847 kb on - strand, within AO353_04185 at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.045 kb on + strand at 898.046 kb on - strand at 898.046 kb on - strand at 898.046 kb on - strand at 898.046 kb on - strand at 898.046 kb on - strand at 898.167 kb on - strand at 898.228 kb on + strand at 898.228 kb on + strand at 898.228 kb on + strand at 898.228 kb on + strand at 898.228 kb on + strand at 898.229 kb on - strand at 898.229 kb on - strand at 898.305 kb on - strand at 898.311 kb on + strand at 898.333 kb on + strand at 898.352 kb on + strand at 898.352 kb on + strand at 898.392 kb on + strand at 898.392 kb on + strand at 898.393 kb on - strand at 898.396 kb on + strand at 898.396 kb on + strand at 898.396 kb on + strand at 898.396 kb on + strand at 898.397 kb on - strand at 898.418 kb on + strand at 898.418 kb on + strand at 898.419 kb on - strand at 898.528 kb on + strand at 898.528 kb on + strand at 898.571 kb on + strand, within AO353_04190 at 899.519 kb on + strand, within AO353_04190 at 899.519 kb on + strand, within AO353_04190 at 899.700 kb on + strand, within AO353_04190 at 899.867 kb on + strand at 899.867 kb on + strand at 899.867 kb on + strand at 899.992 kb on - strand at 900.006 kb on + strand at 900.007 kb on - strand at 900.105 kb on + strand at 900.105 kb on + strand at 900.106 kb on - strand at 900.106 kb on - strand at 900.106 kb on - strand at 900.106 kb on - strand at 900.215 kb on - strand, within AO353_04195 at 900.215 kb on - strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.234 kb on + strand, within AO353_04195 at 900.235 kb on - strand, within AO353_04195 at 900.235 kb on - strand, within AO353_04195 at 900.235 kb on - strand, within AO353_04195 at 900.235 kb on - strand, within AO353_04195 at 900.235 kb on - strand, within AO353_04195 at 900.235 kb on - strand, within AO353_04195 at 900.235 kb on - strand, within AO353_04195 at 900.235 kb on - strand, within AO353_04195 at 900.235 kb on - strand, within AO353_04195 at 900.240 kb on + strand, within AO353_04195 at 900.240 kb on + strand, within AO353_04195 at 900.240 kb on + strand, within AO353_04195 at 900.240 kb on + strand, within AO353_04195 at 900.241 kb on - strand, within AO353_04195 at 900.241 kb on - strand, within AO353_04195 at 900.250 kb on + strand, within AO353_04195 at 900.251 kb on - strand, within AO353_04195 at 900.251 kb on - strand, within AO353_04195 at 900.251 kb on - strand, within AO353_04195 at 900.264 kb on + strand, within AO353_04195 at 900.265 kb on - strand, within AO353_04195 at 900.331 kb on + strand, within AO353_04195 at 900.331 kb on + strand, within AO353_04195 at 900.332 kb on - strand, within AO353_04195 at 900.332 kb on - strand, within AO353_04195 at 900.332 kb on - strand, within AO353_04195 at 900.333 kb on + strand, within AO353_04195 at 900.333 kb on + strand, within AO353_04195 at 900.333 kb on + strand, within AO353_04195 at 900.333 kb on + strand, within AO353_04195 at 900.333 kb on + strand, within AO353_04195 at 900.333 kb on + strand, within AO353_04195 at 900.333 kb on + strand, within AO353_04195 at 900.334 kb on - strand, within AO353_04195 at 900.334 kb on - strand, within AO353_04195 at 900.334 kb on - strand, within AO353_04195 at 900.334 kb on - strand, within AO353_04195 at 900.334 kb on - strand, within AO353_04195 at 900.334 kb on - strand, within AO353_04195 at 900.334 kb on - strand, within AO353_04195 at 900.334 kb on - strand, within AO353_04195 at 900.657 kb on + strand, within AO353_04195 at 900.658 kb on - strand, within AO353_04195 at 900.658 kb on - strand, within AO353_04195 at 900.658 kb on - strand, within AO353_04195 at 900.658 kb on - strand, within AO353_04195 at 900.834 kb on + strand, within AO353_04195 at 900.835 kb on - strand, within AO353_04195 at 900.835 kb on - strand, within AO353_04195 at 900.906 kb on + strand, within AO353_04195 at 900.906 kb on + strand, within AO353_04195
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 897,376 + AO353_04185 0.12 +0.0 897,376 + AO353_04185 0.12 +0.2 897,377 - AO353_04185 0.12 -0.3 897,377 - AO353_04185 0.12 -0.2 897,377 - AO353_04185 0.12 -0.8 897,400 + AO353_04185 0.15 +1.6 897,401 - AO353_04185 0.15 -1.3 897,455 + AO353_04185 0.23 +0.5 897,482 + AO353_04185 0.26 -1.0 897,482 + AO353_04185 0.26 +0.6 897,647 - AO353_04185 0.48 -0.6 897,846 + AO353_04185 0.74 -1.3 897,847 - AO353_04185 0.74 -1.1 897,847 - AO353_04185 0.74 -0.0 898,045 + -2.5 898,045 + -1.2 898,045 + -1.3 898,045 + +0.4 898,045 + -0.9 898,045 + -0.6 898,045 + -2.1 898,045 + -1.0 898,045 + -2.1 898,045 + -1.8 898,045 + -0.5 898,046 - +0.4 898,046 - +0.4 898,046 - -0.6 898,046 - -2.6 898,046 - -2.1 898,167 - -2.9 898,228 + -0.6 898,228 + -1.3 898,228 + -1.2 898,228 + -0.9 898,228 + -2.1 898,229 - -3.4 898,229 - -0.2 898,305 - -2.4 898,311 + -1.4 898,333 + -0.1 898,352 + -1.6 898,352 + -3.0 898,392 + -0.2 898,392 + -0.9 898,393 - -2.7 898,396 + -2.1 898,396 + -0.9 898,396 + -2.2 898,396 + -0.6 898,397 - -1.2 898,418 + -2.2 898,418 + -1.9 898,419 - +0.2 898,528 + -0.6 898,528 + -1.1 898,571 + AO353_04190 0.13 -1.1 899,519 + AO353_04190 0.74 -1.6 899,519 + AO353_04190 0.74 -0.4 899,700 + AO353_04190 0.86 -0.9 899,867 + +0.8 899,867 + -2.0 899,867 + -0.6 899,992 - +0.3 900,006 + -0.5 900,007 - -0.8 900,105 + -0.6 900,105 + -0.0 900,106 - +0.0 900,106 - +0.8 900,106 - -0.3 900,106 - +1.4 900,215 - AO353_04195 0.18 -2.1 900,215 - AO353_04195 0.18 -0.5 900,234 + AO353_04195 0.19 -1.4 900,234 + AO353_04195 0.19 +0.2 900,234 + AO353_04195 0.19 -1.4 900,234 + AO353_04195 0.19 -0.1 900,234 + AO353_04195 0.19 +1.4 900,234 + AO353_04195 0.19 +0.4 900,234 + AO353_04195 0.19 +0.4 900,234 + AO353_04195 0.19 +0.7 900,234 + AO353_04195 0.19 +0.7 900,234 + AO353_04195 0.19 -0.9 900,234 + AO353_04195 0.19 -0.6 900,235 - AO353_04195 0.19 +0.5 900,235 - AO353_04195 0.19 +0.5 900,235 - AO353_04195 0.19 +0.7 900,235 - AO353_04195 0.19 -0.1 900,235 - AO353_04195 0.19 -0.9 900,235 - AO353_04195 0.19 -1.6 900,235 - AO353_04195 0.19 -1.6 900,235 - AO353_04195 0.19 -1.2 900,235 - AO353_04195 0.19 -0.3 900,240 + AO353_04195 0.20 +0.4 900,240 + AO353_04195 0.20 -0.2 900,240 + AO353_04195 0.20 -0.5 900,240 + AO353_04195 0.20 -0.8 900,241 - AO353_04195 0.20 -0.1 900,241 - AO353_04195 0.20 +0.2 900,250 + AO353_04195 0.20 +0.9 900,251 - AO353_04195 0.20 +1.4 900,251 - AO353_04195 0.20 -0.2 900,251 - AO353_04195 0.20 -0.7 900,264 + AO353_04195 0.21 +1.1 900,265 - AO353_04195 0.22 -0.5 900,331 + AO353_04195 0.27 -2.1 900,331 + AO353_04195 0.27 -0.4 900,332 - AO353_04195 0.27 +3.0 900,332 - AO353_04195 0.27 +0.0 900,332 - AO353_04195 0.27 +0.4 900,333 + AO353_04195 0.27 -0.2 900,333 + AO353_04195 0.27 +1.1 900,333 + AO353_04195 0.27 +0.4 900,333 + AO353_04195 0.27 +0.0 900,333 + AO353_04195 0.27 -0.4 900,333 + AO353_04195 0.27 -0.4 900,333 + AO353_04195 0.27 +0.3 900,334 - AO353_04195 0.27 +0.2 900,334 - AO353_04195 0.27 -1.2 900,334 - AO353_04195 0.27 +0.8 900,334 - AO353_04195 0.27 -0.3 900,334 - AO353_04195 0.27 +0.4 900,334 - AO353_04195 0.27 +1.6 900,334 - AO353_04195 0.27 -0.5 900,334 - AO353_04195 0.27 -0.5 900,657 + AO353_04195 0.52 -0.1 900,658 - AO353_04195 0.52 +1.7 900,658 - AO353_04195 0.52 -0.5 900,658 - AO353_04195 0.52 +1.0 900,658 - AO353_04195 0.52 -0.6 900,834 + AO353_04195 0.66 +0.7 900,835 - AO353_04195 0.66 +2.0 900,835 - AO353_04195 0.66 +1.7 900,906 + AO353_04195 0.72 -1.3 900,906 + AO353_04195 0.72 -1.8
Or see this region's nucleotide sequence