Strain Fitness in Shewanella loihica PV-4 around Shew_3825

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
4,553,325	+		Shew_3824	0.36	+0.0
4,553,326	+		Shew_3824	0.36	-0.6
4,553,358	+		Shew_3824	0.38	+0.2
4,553,366	-		Shew_3824	0.38	+0.2
4,553,525	+		Shew_3824	0.48	-2.7
4,553,673	-		Shew_3824	0.57	+0.0
4,553,682	-		Shew_3824	0.58	+0.5
4,553,882	+		Shew_3824	0.71	-0.5
4,553,890	-		Shew_3824	0.71	-0.6
4,553,990	-		Shew_3824	0.77	-0.2
4,553,999	+		Shew_3824	0.78	+1.1
4,554,043	+		Shew_3824	0.81	-0.2
4,554,073	-		Shew_3824	0.82	+1.0
4,554,180	-		Shew_3824	0.89	-1.5
4,554,254	-				+1.0
4,554,321	+				-1.1
4,554,339	-				+0.9
4,554,339	-				+0.2
4,554,348	+				-1.2
4,554,386	+				+0.8
4,554,394	-				+0.8
4,554,414	+				+0.1
4,554,414	+				-0.1
4,554,414	+				-1.8
4,554,414	+				+0.6
4,554,422	-				+0.4
4,554,581	+		Shew_3825	0.18	+1.4
4,554,603	+		Shew_3825	0.19	+0.3
4,554,603	+		Shew_3825	0.19	-1.7
4,554,611	-		Shew_3825	0.19	-2.4
4,554,611	+		Shew_3825	0.19	+1.8
4,554,629	-		Shew_3825	0.21	+1.7
4,554,794	+		Shew_3825	0.31	+2.0
4,554,809	-		Shew_3825	0.32	-0.8
4,554,825	+		Shew_3825	0.33	-0.0
4,554,833	-		Shew_3825	0.34	+0.7
4,554,833	-		Shew_3825	0.34	+0.8
4,554,833	-		Shew_3825	0.34	+0.6
4,554,961	+		Shew_3825	0.42	+0.2
4,554,968	+		Shew_3825	0.43	-0.6
4,554,980	+		Shew_3825	0.43	+0.7
4,555,062	-		Shew_3825	0.49	-0.8
4,555,151	-		Shew_3825	0.54	+1.0
4,555,162	+		Shew_3825	0.55	+1.0
4,555,316	-		Shew_3825	0.65	+0.4
4,555,320	+		Shew_3825	0.65	+0.8
4,555,336	-		Shew_3825	0.66	-0.4
4,555,390	+		Shew_3825	0.70	+1.8
4,555,398	-		Shew_3825	0.70	+1.5
4,555,398	-		Shew_3825	0.70	-0.4
4,555,409	+		Shew_3825	0.71	+0.1
4,555,409	+		Shew_3825	0.71	-0.3
4,555,409	+		Shew_3825	0.71	+0.8
4,555,417	-		Shew_3825	0.72	+1.0
4,555,432	+		Shew_3825	0.73	+0.8
4,555,467	+		Shew_3825	0.75	+1.0
4,555,475	-		Shew_3825	0.75	-0.0
4,555,481	+		Shew_3825	0.76	-0.7
4,555,534	+		Shew_3825	0.79	+0.2
4,555,629	+		Shew_3825	0.85	+0.3
4,555,629	+		Shew_3825	0.85	+1.1
4,555,629	+		Shew_3825	0.85	+0.2
4,555,637	-		Shew_3825	0.86	+0.7
4,555,637	-		Shew_3825	0.86	+0.5
4,555,637	-		Shew_3825	0.86	+0.5
4,555,724	+				-0.2
4,555,798	-				+0.3
4,555,799	-				-0.2
4,555,810	-				+0.5
4,555,824	-				+1.4
4,555,856	+				+1.0
4,555,860	-				+0.4
4,555,924	+				-0.1
4,555,945	+				-2.1
4,555,969	+				+0.3
4,555,969	+				-1.1
4,555,969	+				+0.9
4,555,969	+				+1.7
4,555,969	+				+0.9
4,555,969	+				+0.2
4,555,969	+				+2.1
4,555,977	-				+0.9
4,555,977	-				+0.5
4,555,977	-				+0.2
4,555,977	-				-0.5
4,555,977	-				+0.6
4,556,018	+				-0.1
4,556,050	+		Shew_3826	0.12	-0.0
4,556,092	-		Shew_3826	0.14	-2.1
4,556,170	+		Shew_3826	0.19	-0.4
4,556,242	+		Shew_3826	0.24	-0.2
4,556,251	-		Shew_3826	0.24	+0.4
4,556,298	+		Shew_3826	0.27	+0.6
4,556,336	-		Shew_3826	0.29	+1.8
4,556,350	-		Shew_3826	0.30	+0.5
4,556,364	-		Shew_3826	0.31	+0.4
4,556,467	-		Shew_3826	0.37	+0.5
4,556,467	-		Shew_3826	0.37	-2.4
4,556,534	+		Shew_3826	0.41	+0.5
4,556,536	-		Shew_3826	0.42	-0.1
4,556,542	-		Shew_3826	0.42	-0.5
4,556,556	+		Shew_3826	0.43	+0.6
4,556,694	+		Shew_3826	0.51	-2.4
4,556,818	+		Shew_3826	0.59	+1.0