Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3670 and Shew_3671 are separated by 206 nucleotides Shew_3671 and Shew_3672 are separated by 32 nucleotides Shew_3672 and Shew_3673 are separated by 2 nucleotides Shew_3673 and Shew_3674 are separated by 14 nucleotides
Shew_3670: Shew_3670 - metal dependent phosphohydrolase (RefSeq), at 4,372,600 to 4,373,805
_3670
Shew_3671: Shew_3671 - hypothetical protein (RefSeq), at 4,374,012 to 4,374,218
_3671
Shew_3672: Shew_3672 - hypothetical protein (RefSeq), at 4,374,251 to 4,375,006
_3672
Shew_3673: Shew_3673 - hypothetical protein (RefSeq), at 4,375,009 to 4,375,548
_3673
Shew_3674: Shew_3674 - cobalt transport protein (RefSeq), at 4,375,563 to 4,376,216
_3674
Position (kb) 4374
4375
4376 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4373.295 kb on + strand, within Shew_3670 at 4373.410 kb on + strand, within Shew_3670 at 4373.558 kb on + strand, within Shew_3670 at 4374.009 kb on - strand at 4374.208 kb on - strand at 4374.225 kb on - strand at 4374.241 kb on - strand at 4374.293 kb on + strand at 4374.342 kb on + strand, within Shew_3672 at 4374.342 kb on + strand, within Shew_3672 at 4374.342 kb on + strand, within Shew_3672 at 4374.350 kb on - strand, within Shew_3672 at 4374.350 kb on - strand, within Shew_3672 at 4374.368 kb on - strand, within Shew_3672 at 4374.391 kb on - strand, within Shew_3672 at 4374.466 kb on + strand, within Shew_3672 at 4374.466 kb on + strand, within Shew_3672 at 4374.466 kb on + strand, within Shew_3672 at 4374.466 kb on + strand, within Shew_3672 at 4374.466 kb on + strand, within Shew_3672 at 4374.474 kb on - strand, within Shew_3672 at 4374.528 kb on - strand, within Shew_3672 at 4374.554 kb on + strand, within Shew_3672 at 4374.591 kb on - strand, within Shew_3672 at 4374.591 kb on - strand, within Shew_3672 at 4374.639 kb on + strand, within Shew_3672 at 4374.830 kb on + strand, within Shew_3672 at 4375.184 kb on + strand, within Shew_3673 at 4375.189 kb on + strand, within Shew_3673 at 4375.189 kb on + strand, within Shew_3673 at 4375.449 kb on + strand, within Shew_3673 at 4375.675 kb on + strand, within Shew_3674 at 4375.683 kb on - strand, within Shew_3674
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 1 mg/ml remove 4,373,295 + Shew_3670 0.58 -0.8 4,373,410 + Shew_3670 0.67 +0.3 4,373,558 + Shew_3670 0.79 +0.8 4,374,009 - -1.5 4,374,208 - +0.6 4,374,225 - -0.1 4,374,241 - -1.4 4,374,293 + -0.5 4,374,342 + Shew_3672 0.12 +0.9 4,374,342 + Shew_3672 0.12 +0.6 4,374,342 + Shew_3672 0.12 -0.6 4,374,350 - Shew_3672 0.13 +0.3 4,374,350 - Shew_3672 0.13 +0.5 4,374,368 - Shew_3672 0.15 -0.3 4,374,391 - Shew_3672 0.19 +0.4 4,374,466 + Shew_3672 0.28 +0.7 4,374,466 + Shew_3672 0.28 -2.7 4,374,466 + Shew_3672 0.28 -0.1 4,374,466 + Shew_3672 0.28 +0.1 4,374,466 + Shew_3672 0.28 +2.1 4,374,474 - Shew_3672 0.29 +0.4 4,374,528 - Shew_3672 0.37 +0.3 4,374,554 + Shew_3672 0.40 +0.4 4,374,591 - Shew_3672 0.45 -0.0 4,374,591 - Shew_3672 0.45 +0.3 4,374,639 + Shew_3672 0.51 +0.5 4,374,830 + Shew_3672 0.77 +0.6 4,375,184 + Shew_3673 0.32 -1.6 4,375,189 + Shew_3673 0.33 +0.5 4,375,189 + Shew_3673 0.33 +0.2 4,375,449 + Shew_3673 0.81 +0.0 4,375,675 + Shew_3674 0.17 +0.6 4,375,683 - Shew_3674 0.18 -0.2
Or see this region's nucleotide sequence