Strain Fitness in Shewanella loihica PV-4 around Shew_3648

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
4,348,829	+				-0.2
4,348,865	+				-0.5
4,348,873	-				+0.3
4,348,914	-				-0.0
4,348,940	+				-0.3
4,348,945	-				-1.3
4,349,100	-		Shew_3647	0.29	+0.6
4,349,230	+		Shew_3647	0.46	-1.4
4,349,230	+		Shew_3647	0.46	+1.6
4,349,253	+		Shew_3647	0.49	-0.6
4,349,380	+		Shew_3647	0.65	+0.6
4,349,482	+		Shew_3647	0.78	+1.6
4,349,532	+		Shew_3647	0.84	-0.1
4,349,795	-				+1.9
4,349,955	+		Shew_3648	0.17	+0.6
4,350,027	+		Shew_3648	0.25	+1.3
4,350,027	+		Shew_3648	0.25	+1.9
4,350,108	-		Shew_3648	0.35	+0.1
4,350,185	-		Shew_3648	0.44	-0.2
4,350,254	+		Shew_3648	0.52	+0.9
4,350,363	-		Shew_3648	0.65	+0.3
4,350,644	-				-0.7
4,350,805	-		Shew_3649	0.33	+0.0
4,350,908	+		Shew_3649	0.62	+0.7
4,350,908	+		Shew_3649	0.62	-1.7
4,350,915	-		Shew_3649	0.64	-0.6
4,350,998	+		Shew_3649	0.87	+0.6
4,350,998	+		Shew_3649	0.87	+1.0
4,350,998	+		Shew_3649	0.87	+0.4
4,351,003	+		Shew_3649	0.88	+0.4
4,351,006	-		Shew_3649	0.89	+0.1
4,351,006	-		Shew_3649	0.89	-0.1
4,351,011	-				+0.5
4,351,052	-				-0.4
4,351,078	+				+0.6
4,351,101	-				-0.3
4,351,111	-				-0.5
4,351,112	-				-0.8
4,351,131	+		Shew_3650	0.11	-2.9
4,351,392	-		Shew_3650	0.46	-1.4
4,351,396	+		Shew_3650	0.47	-0.1
4,351,520	-		Shew_3650	0.64	-1.4
4,351,568	-		Shew_3650	0.70	+0.2
4,351,621	+		Shew_3650	0.78	-0.6
4,351,634	+		Shew_3650	0.80	-0.2