Strain Fitness in Shewanella loihica PV-4 around Shew_3462
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,146,530 | - | -0.4 | |||
4,146,596 | + | +0.0 | |||
4,146,604 | - | +0.5 | |||
4,146,620 | + | -0.2 | |||
4,146,627 | - | +0.8 | |||
4,146,694 | - | -0.2 | |||
4,146,836 | + | Shew_3463 | 0.22 | +0.2 | |
4,146,916 | - | Shew_3463 | 0.33 | +0.0 | |
4,146,916 | - | Shew_3463 | 0.33 | -0.7 | |
4,146,970 | + | Shew_3463 | 0.41 | +0.6 |
Or see this region's nucleotide sequence