Strain Fitness in Shewanella loihica PV-4 around Shew_3440

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
4,107,428	+		Shew_3439	0.24	-1.8
4,107,428	+		Shew_3439	0.24	+1.0
4,107,436	-		Shew_3439	0.25	+1.9
4,107,436	-		Shew_3439	0.25	-2.1
4,107,436	+		Shew_3439	0.25	-1.8
4,107,436	-		Shew_3439	0.25	+0.7
4,107,436	-		Shew_3439	0.25	-0.5
4,107,490	-		Shew_3439	0.29	-0.8
4,107,499	+		Shew_3439	0.30	-1.3
4,107,509	+		Shew_3439	0.31	+1.5
4,107,509	+		Shew_3439	0.31	+0.3
4,107,509	+		Shew_3439	0.31	+1.9
4,107,509	+		Shew_3439	0.31	-1.2
4,107,517	-		Shew_3439	0.31	-1.0
4,107,517	-		Shew_3439	0.31	-1.2
4,107,517	-		Shew_3439	0.31	-1.8
4,107,517	-		Shew_3439	0.31	-0.9
4,107,527	+		Shew_3439	0.32	+0.6
4,107,527	-		Shew_3439	0.32	+0.3
4,107,573	+		Shew_3439	0.36	-0.2
4,107,573	+		Shew_3439	0.36	+0.5
4,107,581	-		Shew_3439	0.36	+2.1
4,107,581	-		Shew_3439	0.36	+2.1
4,107,586	-		Shew_3439	0.37	-0.1
4,107,588	+		Shew_3439	0.37	+1.1
4,107,591	-		Shew_3439	0.37	+0.5
4,107,596	-		Shew_3439	0.37	+0.2
4,107,596	-		Shew_3439	0.37	-1.6
4,107,596	-		Shew_3439	0.37	-0.3
4,107,605	+		Shew_3439	0.38	+1.8
4,107,676	+		Shew_3439	0.44	-0.2
4,107,678	+		Shew_3439	0.44	+0.8
4,107,678	+		Shew_3439	0.44	+0.4
4,107,678	+		Shew_3439	0.44	+0.7
4,107,678	+		Shew_3439	0.44	-0.7
4,107,678	+		Shew_3439	0.44	+0.2
4,107,678	+		Shew_3439	0.44	+0.2
4,107,678	+		Shew_3439	0.44	+0.2
4,107,678	+		Shew_3439	0.44	+0.9
4,107,678	+		Shew_3439	0.44	+0.3
4,107,678	+		Shew_3439	0.44	-2.5
4,107,678	+		Shew_3439	0.44	-0.6
4,107,678	+		Shew_3439	0.44	+0.6
4,107,678	+		Shew_3439	0.44	+0.4
4,107,678	+		Shew_3439	0.44	+0.3
4,107,678	+		Shew_3439	0.44	+0.2
4,107,678	+		Shew_3439	0.44	+0.9
4,107,686	-		Shew_3439	0.45	-2.0
4,107,686	-		Shew_3439	0.45	-3.5
4,107,686	-		Shew_3439	0.45	+1.0
4,107,686	-		Shew_3439	0.45	-0.4
4,107,812	+		Shew_3439	0.54	+0.4
4,107,825	+		Shew_3439	0.55	-1.6
4,107,825	+		Shew_3439	0.55	+1.0
4,107,833	-		Shew_3439	0.56	+0.2
4,107,856	+		Shew_3439	0.58	+0.4
4,107,969	-		Shew_3439	0.67	-1.8
4,107,986	+		Shew_3439	0.68	+0.0
4,108,041	+		Shew_3439	0.72	+0.5
4,108,116	-		Shew_3439	0.78	+0.7
4,108,148	+		Shew_3439	0.81	-0.1
4,108,148	+		Shew_3439	0.81	+0.8
4,108,169	+		Shew_3439	0.83	-2.4
4,108,190	-		Shew_3439	0.84	-1.9
4,108,267	+				+0.4
4,108,299	+				+0.5
4,108,323	+				-0.2
4,108,368	+				+1.0
4,108,452	+				-2.2
4,108,452	+				+0.3
4,108,542	-		Shew_3440	0.12	-1.0
4,108,705	-		Shew_3440	0.30	-2.1
4,108,899	-		Shew_3440	0.52	-1.8
4,109,097	+		Shew_3440	0.73	-0.8
4,109,954	+				+0.2
4,110,018	+				+0.2
4,110,023	+				+1.4
4,110,023	+				+0.7
4,110,024	+				+0.7
4,110,024	+				-0.6
4,110,024	+				+0.0
4,110,029	+				-1.4
4,110,029	+				-2.5
4,110,031	-				-3.4
4,110,031	-				+0.9
4,110,037	-				+0.8
4,110,054	-		Shew_3442	0.11	+0.8