Strain Fitness in Shewanella loihica PV-4 around Shew_3402

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
4,051,813	+		Shew_3401	0.56	+0.2
4,052,061	-		Shew_3401	0.74	+0.2
4,052,214	-		Shew_3401	0.85	+0.3
4,052,330	+				-0.4
4,052,364	-				-0.3
4,052,400	+				-0.4
4,052,734	+		Shew_3402	0.32	+1.1
4,052,754	+		Shew_3402	0.34	+2.8
4,052,754	+		Shew_3402	0.34	+0.3
4,052,762	-		Shew_3402	0.35	+0.4
4,052,762	-		Shew_3402	0.35	-1.2
4,052,762	-		Shew_3402	0.35	+0.4
4,052,762	-		Shew_3402	0.35	+1.0
4,052,803	+		Shew_3402	0.39	-0.1
4,052,811	-		Shew_3402	0.40	+0.5
4,052,843	-		Shew_3402	0.43	+1.3
4,052,973	+		Shew_3402	0.57	+0.1
4,052,981	-		Shew_3402	0.57	+0.1
4,053,005	+		Shew_3402	0.60	+0.1
4,053,103	+		Shew_3402	0.70	-1.1
4,053,430	-				+0.1
4,053,462	+				-0.0
4,053,492	-		Shew_3403	0.12	-0.0
4,053,514	+		Shew_3403	0.15	+1.2
4,053,522	-		Shew_3403	0.16	+0.4
4,053,542	-		Shew_3403	0.19	-1.1
4,053,773	-		Shew_3403	0.47	+0.1
4,053,795	+		Shew_3403	0.49	-0.0
4,053,901	-		Shew_3403	0.62	-3.4
4,053,901	-		Shew_3403	0.62	-0.2
4,053,976	+		Shew_3403	0.72	-2.1
4,054,043	-		Shew_3403	0.80	+1.2