Strain Fitness in Shewanella loihica PV-4 around Shew_3400

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
4,048,005	+		Shew_3399	0.57	+0.3
4,048,017	+		Shew_3399	0.57	+0.7
4,048,056	-		Shew_3399	0.59	+0.7
4,048,318	-		Shew_3399	0.71	+1.5
4,048,858	-				+0.1
4,049,149	+				+0.4
4,049,379	-		Shew_3400	0.21	-0.1
4,049,449	+		Shew_3400	0.25	-1.7
4,049,680	+		Shew_3400	0.37	+0.1
4,049,796	+		Shew_3400	0.43	-0.4
4,049,854	-		Shew_3400	0.46	-1.8
4,050,122	+		Shew_3400	0.60	-2.4
4,050,337	-		Shew_3400	0.72	+1.4
4,050,460	+		Shew_3400	0.78	-1.1
4,050,460	+		Shew_3400	0.78	+0.3
4,051,071	-				+0.7
4,051,116	-				+0.4
4,051,116	-				+1.4
4,051,118	+				+0.6
4,051,190	-		Shew_3401	0.10	+2.1
4,051,200	-		Shew_3401	0.11	+0.3
4,051,357	-		Shew_3401	0.23	+0.1
4,051,379	+		Shew_3401	0.24	+0.3
4,051,813	+		Shew_3401	0.56	+0.2