Strain Fitness in Shewanella loihica PV-4 around Shew_3385

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
4,033,581	-				-1.8
4,033,858	+	uvrD	Shew_3385	0.13	-4.1
4,033,945	+	uvrD	Shew_3385	0.17	-3.4
4,033,953	-	uvrD	Shew_3385	0.17	-5.7
4,034,059	+	uvrD	Shew_3385	0.22	-1.8
4,034,234	-	uvrD	Shew_3385	0.30	-4.1
4,034,730	+	uvrD	Shew_3385	0.53	-2.8
4,034,851	+	uvrD	Shew_3385	0.58	-4.0
4,035,383	+	uvrD	Shew_3385	0.83	-4.2
4,035,400	-	uvrD	Shew_3385	0.84	-2.4
4,035,428	+	uvrD	Shew_3385	0.85	-1.8
4,035,555	-				-2.0
4,035,949	+				+0.5
4,036,158	+		Shew_3386	0.24	-0.2
4,036,263	-		Shew_3386	0.36	-0.9
4,036,601	-		Shew_3386	0.72	+0.4