Strain Fitness in Shewanella loihica PV-4 around Shew_3266
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,903,221 | + | Shew_3264 | 0.86 | +0.3 | |
3,903,421 | - | -2.7 | |||
3,903,680 | - | -1.6 | |||
3,903,788 | + | +0.1 | |||
3,903,956 | + | Shew_3265 | 0.39 | +0.7 | |
3,904,763 | - | dipZ | Shew_3266 | 0.34 | -2.6 |
3,905,585 | + | dipZ | Shew_3266 | 0.79 | -0.5 |
3,905,751 | - | dipZ | Shew_3266 | 0.89 | -1.2 |
3,905,841 | - | -1.8 | |||
3,906,179 | + | +0.8 | |||
3,906,269 | + | +3.2 | |||
3,906,343 | - | Shew_3267 | 0.14 | +0.9 | |
3,906,745 | - | Shew_3267 | 0.39 | +1.5 | |
3,906,847 | - | Shew_3267 | 0.45 | +4.4 |
Or see this region's nucleotide sequence