Strain Fitness in Shewanella loihica PV-4 around Shew_3213

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
3,830,855	-				+0.4
3,830,855	+				+0.4
3,830,855	-				-0.5
3,830,963	+				-0.5
3,830,970	+				-0.3
3,830,978	-				+0.2
3,830,978	-				-1.8
3,831,106	+				+0.7
3,831,118	+				-0.4
3,831,118	+				-1.0
3,831,126	-				+0.7
3,831,126	-				-0.2
3,831,126	-				+1.5
3,831,133	+				+0.2
3,831,133	+				-0.0
3,831,150	-				+0.6
3,831,165	-				+2.0
3,831,165	-				-0.5
3,831,169	+				+0.4
3,831,178	-				-0.6
3,831,178	-				+0.7
3,831,276	-				+0.4
3,831,298	+				+2.1
3,831,302	+				+0.9
3,831,323	+				-0.7
3,831,599	-				+1.3
3,831,661	-				+0.7
3,831,676	-				+0.5
3,831,846	-				-2.4
3,831,846	-				+0.6
3,831,857	+				+0.4
3,831,937	-		Shew_3213	0.20	-0.1
3,832,022	-		Shew_3213	0.41	-0.4
3,832,108	-		Shew_3213	0.62	-0.5
3,832,350	+				+1.2
3,832,435	+				+0.4
3,832,465	+				-1.9
3,832,637	-		Shew_3214	0.59	-0.4
3,832,638	+		Shew_3214	0.59	-0.6
3,832,646	-		Shew_3214	0.62	+0.1
3,832,678	-		Shew_3214	0.75	+0.8
3,832,782	+				-0.3
3,832,835	+				+0.4
3,833,199	+		Shew_3215	0.13	+0.6
3,833,199	+		Shew_3215	0.13	+0.1
3,833,205	+		Shew_3215	0.13	+0.5