Strain Fitness in Shewanella loihica PV-4 around Shew_3201

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
3,817,045	-				-0.3
3,817,192	+				-0.1
3,817,343	-				+0.2
3,817,343	-				+1.5
3,817,343	-				+1.4
3,817,345	+				-0.1
3,817,430	-				+0.6
3,818,082	+		Shew_3201	0.26	-0.4
3,818,244	+		Shew_3201	0.51	+0.9
3,818,425	-		Shew_3201	0.78	-0.2
3,818,443	-		Shew_3201	0.81	-2.6
3,818,551	-				+1.4
3,818,576	+				-1.3
3,818,873	-		Shew_3202	0.12	+2.1
3,818,900	+		Shew_3202	0.13	+1.1
3,818,900	+		Shew_3202	0.13	+0.2
3,818,908	-		Shew_3202	0.13	+0.1
3,818,908	-		Shew_3202	0.13	+0.0
3,818,908	-		Shew_3202	0.13	-0.4
3,818,908	-		Shew_3202	0.13	-1.6
3,819,043	-		Shew_3202	0.19	-0.6
3,819,120	-		Shew_3202	0.22	-0.2
3,819,278	-		Shew_3202	0.28	+2.1
3,819,522	+		Shew_3202	0.38	+0.2