Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3092 and Shew_3093 are separated by 52 nucleotides Shew_3093 and Shew_3094 are separated by 43 nucleotides Shew_3094 and Shew_3095 are separated by 29 nucleotides
Shew_3092: Shew_3092 - membrane-flanked domain-containing protein (RefSeq), at 3,672,324 to 3,673,892
_3092
Shew_3093: Shew_3093 - hypothetical protein (RefSeq), at 3,673,945 to 3,674,499
_3093
Shew_3094: Shew_3094 - hypothetical protein (RefSeq), at 3,674,543 to 3,675,304
_3094
Shew_3095: Shew_3095 - hypothetical protein (RefSeq), at 3,675,334 to 3,675,723
_3095
Position (kb)
3673
3674
3675 Strain fitness (log2 ratio)
-2
-1
0
1 at 3673.060 kb on + strand, within Shew_3092 at 3673.125 kb on - strand, within Shew_3092 at 3673.183 kb on - strand, within Shew_3092 at 3673.267 kb on + strand, within Shew_3092 at 3673.276 kb on - strand, within Shew_3092 at 3673.526 kb on + strand, within Shew_3092 at 3673.543 kb on + strand, within Shew_3092 at 3673.821 kb on - strand at 3673.960 kb on - strand at 3674.283 kb on + strand, within Shew_3093 at 3674.461 kb on + strand at 3674.625 kb on + strand, within Shew_3094 at 3674.630 kb on + strand, within Shew_3094 at 3674.726 kb on + strand, within Shew_3094 at 3674.795 kb on - strand, within Shew_3094 at 3675.018 kb on - strand, within Shew_3094 at 3675.099 kb on - strand, within Shew_3094 at 3675.099 kb on - strand, within Shew_3094 at 3675.231 kb on + strand at 3675.239 kb on - strand at 3675.390 kb on - strand, within Shew_3095 at 3675.392 kb on - strand, within Shew_3095
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 1 mg/ml remove 3,673,060 + Shew_3092 0.47 +0.5 3,673,125 - Shew_3092 0.51 -2.0 3,673,183 - Shew_3092 0.55 +0.1 3,673,267 + Shew_3092 0.60 +0.0 3,673,276 - Shew_3092 0.61 +0.3 3,673,526 + Shew_3092 0.77 -0.3 3,673,543 + Shew_3092 0.78 +0.4 3,673,821 - +0.8 3,673,960 - +1.5 3,674,283 + Shew_3093 0.61 +0.6 3,674,461 + -0.5 3,674,625 + Shew_3094 0.11 +1.0 3,674,630 + Shew_3094 0.11 +0.9 3,674,726 + Shew_3094 0.24 +0.1 3,674,795 - Shew_3094 0.33 -2.6 3,675,018 - Shew_3094 0.62 +0.1 3,675,099 - Shew_3094 0.73 +0.2 3,675,099 - Shew_3094 0.73 +0.5 3,675,231 + -1.9 3,675,239 - -1.4 3,675,390 - Shew_3095 0.14 +1.4 3,675,392 - Shew_3095 0.15 +0.5
Or see this region's nucleotide sequence