Strain Fitness in Shewanella loihica PV-4 around Shew_2960

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
3,507,426	+		Shew_2959	0.63	-2.3
3,507,426	+		Shew_2959	0.63	-0.1
3,507,445	+		Shew_2959	0.65	+1.1
3,507,687	-				+0.4
3,507,722	-				-0.1
3,507,809	-				+0.7
3,507,809	-				+2.5
3,508,340	-				-1.3
3,508,340	-				+0.7
3,508,340	-				+0.7
3,508,340	-				+0.0
3,508,473	+				-0.7
3,508,502	+				+0.3
3,508,502	+				+1.3
3,508,502	+				-0.3
3,508,510	-				-0.2
3,508,510	-				-0.2
3,508,510	-				+0.2
3,508,550	+				+0.8
3,508,550	+				-0.4
3,508,558	-				-0.4
3,508,577	+				-0.2
3,508,623	-				+0.9
3,508,895	-				-0.2
3,508,934	+		Shew_2960	0.11	+0.1
3,509,245	-		Shew_2960	0.17	+0.5
3,509,604	+		Shew_2960	0.24	-0.4
3,509,614	-		Shew_2960	0.24	+0.2
3,509,778	-		Shew_2960	0.28	+0.1
3,509,962	-		Shew_2960	0.31	-0.5
3,510,003	-		Shew_2960	0.32	+0.3
3,510,360	-		Shew_2960	0.39	-0.0
3,510,424	-		Shew_2960	0.41	-0.8
3,510,614	-		Shew_2960	0.44	-0.5
3,510,823	-		Shew_2960	0.49	+0.1
3,510,964	+		Shew_2960	0.52	-1.2
3,510,971	+		Shew_2960	0.52	+0.9
3,511,076	+		Shew_2960	0.54	+0.0
3,511,191	+		Shew_2960	0.56	+0.2
3,511,225	-		Shew_2960	0.57	-2.3
3,511,330	+		Shew_2960	0.59	-2.0
3,511,636	-		Shew_2960	0.65	+0.3
3,511,636	-		Shew_2960	0.65	+0.2
3,511,976	+		Shew_2960	0.72	+0.7
3,511,976	+		Shew_2960	0.72	-1.3
3,512,238	-		Shew_2960	0.77	+0.3
3,512,246	+		Shew_2960	0.77	-1.6
3,512,537	+		Shew_2960	0.83	-0.0
3,513,232	-				+0.2
3,513,259	-				-1.5
3,513,289	-				+0.8
3,513,501	+		Shew_2961	0.18	+0.3
3,513,509	-		Shew_2961	0.21	-0.1
3,513,509	-		Shew_2961	0.21	+1.3
3,513,509	-		Shew_2961	0.21	-2.7
3,513,509	-		Shew_2961	0.21	-0.5
3,513,706	+				-0.1
3,514,021	+				-1.8
3,514,302	-		Shew_2962	0.19	-0.3